Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-5A0A0G2JFX6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-5A0A0G2JFX6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-5A0A0G2JFX6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav7-5A0A0G2JFX6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-5A0A0G2JFX6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.12■□□□□ 0.17
Trav7-5A0A0G2JFX6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.12■□□□□ 0.17
Trav7-5A0A0G2JFX6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.12■□□□□ 0.17
Trav7-5A0A0G2JFX6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-5A0A0G2JFX6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-5A0A0G2JFX6 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.12■□□□□ 0.17
Trav7-5A0A0G2JFX6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-5A0A0G2JFX6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-5A0A0G2JFX6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-5A0A0G2JFX6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-5A0A0G2JFX6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Trav7-5A0A0G2JFX6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-5A0A0G2JFX6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-5A0A0G2JFX6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-5A0A0G2JFX6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-5A0A0G2JFX6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-5A0A0G2JFX6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-5A0A0G2JFX6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-5A0A0G2JFX6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-5A0A0G2JFX6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav7-5A0A0G2JFX6 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.09■□□□□ 0.17
Trav7-5A0A0G2JFX6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-5A0A0G2JFX6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav7-5A0A0G2JFX6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-5A0A0G2JFX6 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Trav7-5A0A0G2JFX6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-5A0A0G2JFX6 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-5A0A0G2JFX6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-5A0A0G2JFX6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav7-5A0A0G2JFX6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav7-5A0A0G2JFX6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7-5A0A0G2JFX6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav7-5A0A0G2JFX6 Gm14117-201ENSMUST00000122417 843 ntBASIC16.08■□□□□ 0.16
Trav7-5A0A0G2JFX6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7-5A0A0G2JFX6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7-5A0A0G2JFX6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.08■□□□□ 0.16
Trav7-5A0A0G2JFX6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7-5A0A0G2JFX6 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC16.08■□□□□ 0.16
Trav7-5A0A0G2JFX6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7-5A0A0G2JFX6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav7-5A0A0G2JFX6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav7-5A0A0G2JFX6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav7-5A0A0G2JFX6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-5A0A0G2JFX6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-5A0A0G2JFX6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-5A0A0G2JFX6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-5A0A0G2JFX6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-5A0A0G2JFX6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-5A0A0G2JFX6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-5A0A0G2JFX6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-5A0A0G2JFX6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-5A0A0G2JFX6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav7-5A0A0G2JFX6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav7-5A0A0G2JFX6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-5A0A0G2JFX6 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Trav7-5A0A0G2JFX6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-5A0A0G2JFX6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-5A0A0G2JFX6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-5A0A0G2JFX6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-5A0A0G2JFX6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-5A0A0G2JFX6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-5A0A0G2JFX6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav7-5A0A0G2JFX6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-5A0A0G2JFX6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-5A0A0G2JFX6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav7-5A0A0G2JFX6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-5A0A0G2JFX6 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-5A0A0G2JFX6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav7-5A0A0G2JFX6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-5A0A0G2JFX6 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.04■□□□□ 0.16
Trav7-5A0A0G2JFX6 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-5A0A0G2JFX6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-5A0A0G2JFX6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav7-5A0A0G2JFX6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.04■□□□□ 0.16
Trav7-5A0A0G2JFX6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-5A0A0G2JFX6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-5A0A0G2JFX6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-5A0A0G2JFX6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-5A0A0G2JFX6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-5A0A0G2JFX6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms