Protein–RNA interactions for Protein: A0A0B4J1J5

Ighv9-3, Immunoglobulin heavy variable V9-3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-3A0A0B4J1J5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.07■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.07■□□□□ 0.32
Ighv9-3A0A0B4J1J5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv9-3A0A0B4J1J5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.07■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.06■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-3A0A0B4J1J5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.06■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Ighv9-3A0A0B4J1J5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.06■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.05■□□□□ 0.32
Ighv9-3A0A0B4J1J5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ighv9-3A0A0B4J1J5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.04■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.02■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.02■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv9-3A0A0B4J1J5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.02■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv9-3A0A0B4J1J5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ighv9-3A0A0B4J1J5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Ighv9-3A0A0B4J1J5 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.01■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv9-3A0A0B4J1J5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.99■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv9-3A0A0B4J1J5 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv9-3A0A0B4J1J5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms