Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9n-4A0A075B631 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9n-4A0A075B631 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav9n-4A0A075B631 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9n-4A0A075B631 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9n-4A0A075B631 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav9n-4A0A075B631 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav9n-4A0A075B631 Gm28536-201ENSMUST00000190971 1317 ntBASIC13.99□□□□□ -0.17
Trav9n-4A0A075B631 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9n-4A0A075B631 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9n-4A0A075B631 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9n-4A0A075B631 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav9n-4A0A075B631 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav9n-4A0A075B631 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav9n-4A0A075B631 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav9n-4A0A075B631 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Hsf1-207ENSMUST00000228371 2102 ntBASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav9n-4A0A075B631 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9n-4A0A075B631 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9n-4A0A075B631 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9n-4A0A075B631 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC13.96□□□□□ -0.17
Trav9n-4A0A075B631 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9n-4A0A075B631 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav9n-4A0A075B631 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav9n-4A0A075B631 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trav9n-4A0A075B631 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Trav9n-4A0A075B631 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9n-4A0A075B631 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9n-4A0A075B631 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9n-4A0A075B631 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav9n-4A0A075B631 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9n-4A0A075B631 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9n-4A0A075B631 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9n-4A0A075B631 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9n-4A0A075B631 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9n-4A0A075B631 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9n-4A0A075B631 Gm8093-201ENSMUST00000128935 1892 ntBASIC13.95□□□□□ -0.18
Trav9n-4A0A075B631 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav9n-4A0A075B631 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-4A0A075B631 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-4A0A075B631 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav9n-4A0A075B631 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-4A0A075B631 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-4A0A075B631 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-4A0A075B631 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-4A0A075B631 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-4A0A075B631 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-4A0A075B631 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Trav9n-4A0A075B631 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav9n-4A0A075B631 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trav9n-4A0A075B631 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms