Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-1A0A075B5Z8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-1A0A075B5Z8 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-1A0A075B5Z8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-1A0A075B5Z8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-1A0A075B5Z8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trav6-1A0A075B5Z8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-1A0A075B5Z8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trav6-1A0A075B5Z8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.55■□□□□ 0.24
Trav6-1A0A075B5Z8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav6-1A0A075B5Z8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-1A0A075B5Z8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.54■□□□□ 0.24
Trav6-1A0A075B5Z8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-1A0A075B5Z8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-1A0A075B5Z8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-1A0A075B5Z8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav6-1A0A075B5Z8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav6-1A0A075B5Z8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-1A0A075B5Z8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-1A0A075B5Z8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
Trav6-1A0A075B5Z8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav6-1A0A075B5Z8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-1A0A075B5Z8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-1A0A075B5Z8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-1A0A075B5Z8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-1A0A075B5Z8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-1A0A075B5Z8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trav6-1A0A075B5Z8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav6-1A0A075B5Z8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trav6-1A0A075B5Z8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.52■□□□□ 0.24
Trav6-1A0A075B5Z8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav6-1A0A075B5Z8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-1A0A075B5Z8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-1A0A075B5Z8 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-1A0A075B5Z8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-1A0A075B5Z8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trav6-1A0A075B5Z8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav6-1A0A075B5Z8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6-1A0A075B5Z8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6-1A0A075B5Z8 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6-1A0A075B5Z8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav6-1A0A075B5Z8 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.52■□□□□ 0.23
Trav6-1A0A075B5Z8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-1A0A075B5Z8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-1A0A075B5Z8 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav6-1A0A075B5Z8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-1A0A075B5Z8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-1A0A075B5Z8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-1A0A075B5Z8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav6-1A0A075B5Z8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav6-1A0A075B5Z8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav6-1A0A075B5Z8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav6-1A0A075B5Z8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-1A0A075B5Z8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-1A0A075B5Z8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.5■□□□□ 0.23
Trav6-1A0A075B5Z8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-1A0A075B5Z8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav6-1A0A075B5Z8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav6-1A0A075B5Z8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-1A0A075B5Z8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-1A0A075B5Z8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-1A0A075B5Z8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav6-1A0A075B5Z8 Gm14523-201ENSMUST00000117260 558 ntBASIC16.49■□□□□ 0.23
Trav6-1A0A075B5Z8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.49■□□□□ 0.23
Trav6-1A0A075B5Z8 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.49■□□□□ 0.23
Trav6-1A0A075B5Z8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.49■□□□□ 0.23
Trav6-1A0A075B5Z8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-1A0A075B5Z8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-1A0A075B5Z8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-1A0A075B5Z8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav6-1A0A075B5Z8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav6-1A0A075B5Z8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-1A0A075B5Z8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-1A0A075B5Z8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-1A0A075B5Z8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-1A0A075B5Z8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-1A0A075B5Z8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-1A0A075B5Z8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-1A0A075B5Z8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-1A0A075B5Z8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-1A0A075B5Z8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav6-1A0A075B5Z8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-1A0A075B5Z8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav6-1A0A075B5Z8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav6-1A0A075B5Z8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-1A0A075B5Z8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-1A0A075B5Z8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-1A0A075B5Z8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-1A0A075B5Z8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-1A0A075B5Z8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-1A0A075B5Z8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-1A0A075B5Z8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav6-1A0A075B5Z8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.47■□□□□ 0.23
Trav6-1A0A075B5Z8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-1A0A075B5Z8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav6-1A0A075B5Z8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav6-1A0A075B5Z8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-1A0A075B5Z8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav6-1A0A075B5Z8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav6-1A0A075B5Z8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms