Protein–RNA interactions for Protein: Q9Z0E3

Aire, Autoimmune regulator, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AireQ9Z0E3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AireQ9Z0E3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
AireQ9Z0E3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AireQ9Z0E3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
AireQ9Z0E3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
AireQ9Z0E3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AireQ9Z0E3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AireQ9Z0E3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AireQ9Z0E3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AireQ9Z0E3 Gm9959-201ENSMUST00000068277 390 ntBASIC18.29■□□□□ 0.52
AireQ9Z0E3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AireQ9Z0E3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AireQ9Z0E3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AireQ9Z0E3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AireQ9Z0E3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AireQ9Z0E3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AireQ9Z0E3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
AireQ9Z0E3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AireQ9Z0E3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AireQ9Z0E3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AireQ9Z0E3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AireQ9Z0E3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AireQ9Z0E3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AireQ9Z0E3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
AireQ9Z0E3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.27■□□□□ 0.52
AireQ9Z0E3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AireQ9Z0E3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AireQ9Z0E3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AireQ9Z0E3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
AireQ9Z0E3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AireQ9Z0E3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.26■□□□□ 0.51
AireQ9Z0E3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
AireQ9Z0E3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
AireQ9Z0E3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.26■□□□□ 0.51
AireQ9Z0E3 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.25■□□□□ 0.51
AireQ9Z0E3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AireQ9Z0E3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AireQ9Z0E3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AireQ9Z0E3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.25■□□□□ 0.51
AireQ9Z0E3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.25■□□□□ 0.51
AireQ9Z0E3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
AireQ9Z0E3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AireQ9Z0E3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AireQ9Z0E3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AireQ9Z0E3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AireQ9Z0E3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AireQ9Z0E3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
AireQ9Z0E3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
AireQ9Z0E3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AireQ9Z0E3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
AireQ9Z0E3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AireQ9Z0E3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AireQ9Z0E3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
AireQ9Z0E3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
AireQ9Z0E3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AireQ9Z0E3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.23■□□□□ 0.51
AireQ9Z0E3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.23■□□□□ 0.51
AireQ9Z0E3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AireQ9Z0E3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AireQ9Z0E3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AireQ9Z0E3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
AireQ9Z0E3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AireQ9Z0E3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AireQ9Z0E3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
AireQ9Z0E3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AireQ9Z0E3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AireQ9Z0E3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AireQ9Z0E3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AireQ9Z0E3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AireQ9Z0E3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AireQ9Z0E3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
AireQ9Z0E3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AireQ9Z0E3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
AireQ9Z0E3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AireQ9Z0E3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AireQ9Z0E3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AireQ9Z0E3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AireQ9Z0E3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.21■□□□□ 0.51
AireQ9Z0E3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
AireQ9Z0E3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AireQ9Z0E3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
AireQ9Z0E3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.21■□□□□ 0.51
AireQ9Z0E3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AireQ9Z0E3 Gm10232-201ENSMUST00000089221 720 ntBASIC18.21■□□□□ 0.51
AireQ9Z0E3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
AireQ9Z0E3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
AireQ9Z0E3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
AireQ9Z0E3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
AireQ9Z0E3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
AireQ9Z0E3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AireQ9Z0E3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
AireQ9Z0E3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AireQ9Z0E3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AireQ9Z0E3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
AireQ9Z0E3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
AireQ9Z0E3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AireQ9Z0E3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
AireQ9Z0E3 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
AireQ9Z0E3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
AireQ9Z0E3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms