Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tmem54Q9D7S1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tmem54Q9D7S1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tmem54Q9D7S1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Tmem54Q9D7S1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tmem54Q9D7S1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Gm22238-201ENSMUST00000175222 88 ntBASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Tmem54Q9D7S1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmem54Q9D7S1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmem54Q9D7S1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tmem54Q9D7S1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.1■□□□□ 0.49
Tmem54Q9D7S1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tmem54Q9D7S1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.1■□□□□ 0.49
Tmem54Q9D7S1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Tmem54Q9D7S1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmem54Q9D7S1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmem54Q9D7S1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.09■□□□□ 0.49
Tmem54Q9D7S1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.09■□□□□ 0.49
Tmem54Q9D7S1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tmem54Q9D7S1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tmem54Q9D7S1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Tmem54Q9D7S1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Tmem54Q9D7S1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tmem54Q9D7S1 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tmem54Q9D7S1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tmem54Q9D7S1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.06■□□□□ 0.48
Tmem54Q9D7S1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tmem54Q9D7S1 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tmem54Q9D7S1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tmem54Q9D7S1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tmem54Q9D7S1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tmem54Q9D7S1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tmem54Q9D7S1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tmem54Q9D7S1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
Tmem54Q9D7S1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.05■□□□□ 0.48
Tmem54Q9D7S1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tmem54Q9D7S1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tmem54Q9D7S1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Tmem54Q9D7S1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tmem54Q9D7S1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Tmem54Q9D7S1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.04■□□□□ 0.48
Tmem54Q9D7S1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Tmem54Q9D7S1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms