Protein–RNA interactions for Protein: Q9CR22

Tmem42, Transmembrane protein 42, mousemouse

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem42Q9CR22 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tmem42Q9CR22 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.97■□□□□ 0.47
Tmem42Q9CR22 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.97■□□□□ 0.47
Tmem42Q9CR22 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Tmem42Q9CR22 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tmem42Q9CR22 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmem42Q9CR22 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmem42Q9CR22 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Tmem42Q9CR22 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Tmem42Q9CR22 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tmem42Q9CR22 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.96■□□□□ 0.47
Tmem42Q9CR22 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Tmem42Q9CR22 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Tmem42Q9CR22 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tmem42Q9CR22 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Tmem42Q9CR22 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Tmem42Q9CR22 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmem42Q9CR22 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmem42Q9CR22 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmem42Q9CR22 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tmem42Q9CR22 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmem42Q9CR22 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tmem42Q9CR22 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmem42Q9CR22 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tmem42Q9CR22 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Tmem42Q9CR22 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.95■□□□□ 0.46
Tmem42Q9CR22 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmem42Q9CR22 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.95■□□□□ 0.46
Tmem42Q9CR22 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmem42Q9CR22 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmem42Q9CR22 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tmem42Q9CR22 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmem42Q9CR22 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmem42Q9CR22 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmem42Q9CR22 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmem42Q9CR22 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmem42Q9CR22 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmem42Q9CR22 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmem42Q9CR22 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmem42Q9CR22 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmem42Q9CR22 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmem42Q9CR22 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmem42Q9CR22 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmem42Q9CR22 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Tmem42Q9CR22 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tmem42Q9CR22 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tmem42Q9CR22 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tmem42Q9CR22 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.93■□□□□ 0.46
Tmem42Q9CR22 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tmem42Q9CR22 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tmem42Q9CR22 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Tmem42Q9CR22 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.93■□□□□ 0.46
Tmem42Q9CR22 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.93■□□□□ 0.46
Tmem42Q9CR22 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Tmem42Q9CR22 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tmem42Q9CR22 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmem42Q9CR22 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tmem42Q9CR22 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmem42Q9CR22 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmem42Q9CR22 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.92■□□□□ 0.46
Tmem42Q9CR22 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Tmem42Q9CR22 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmem42Q9CR22 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmem42Q9CR22 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmem42Q9CR22 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmem42Q9CR22 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tmem42Q9CR22 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tmem42Q9CR22 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tmem42Q9CR22 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tmem42Q9CR22 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tmem42Q9CR22 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tmem42Q9CR22 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tmem42Q9CR22 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tmem42Q9CR22 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tmem42Q9CR22 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tmem42Q9CR22 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tmem42Q9CR22 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tmem42Q9CR22 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tmem42Q9CR22 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tmem42Q9CR22 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tmem42Q9CR22 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Tmem42Q9CR22 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tmem42Q9CR22 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tmem42Q9CR22 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Tmem42Q9CR22 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.9■□□□□ 0.46
Tmem42Q9CR22 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tmem42Q9CR22 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.9■□□□□ 0.46
Tmem42Q9CR22 Gm45444-201ENSMUST00000211394 898 ntBASIC17.9■□□□□ 0.46
Tmem42Q9CR22 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Tmem42Q9CR22 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tmem42Q9CR22 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tmem42Q9CR22 Cap2-205ENSMUST00000225824 1634 ntBASIC17.9■□□□□ 0.46
Tmem42Q9CR22 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tmem42Q9CR22 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tmem42Q9CR22 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Tmem42Q9CR22 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.89■□□□□ 0.45
Tmem42Q9CR22 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Tmem42Q9CR22 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.89■□□□□ 0.45
Tmem42Q9CR22 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Tmem42Q9CR22 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms