Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.45■□□□□ 0.86
Pcdhb4Q91XZ6 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.45■□□□□ 0.86
Pcdhb4Q91XZ6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhb4Q91XZ6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb4Q91XZ6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb4Q91XZ6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb4Q91XZ6 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.44■□□□□ 0.86
Pcdhb4Q91XZ6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb4Q91XZ6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb4Q91XZ6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb4Q91XZ6 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.44■□□□□ 0.86
Pcdhb4Q91XZ6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb4Q91XZ6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb4Q91XZ6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb4Q91XZ6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb4Q91XZ6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb4Q91XZ6 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb4Q91XZ6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb4Q91XZ6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb4Q91XZ6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb4Q91XZ6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb4Q91XZ6 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.43■□□□□ 0.86
Pcdhb4Q91XZ6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb4Q91XZ6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhb4Q91XZ6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb4Q91XZ6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb4Q91XZ6 Golph3-202ENSMUST00000226517 2359 ntBASIC20.43■□□□□ 0.86
Pcdhb4Q91XZ6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb4Q91XZ6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb4Q91XZ6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb4Q91XZ6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb4Q91XZ6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb4Q91XZ6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb4Q91XZ6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb4Q91XZ6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb4Q91XZ6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb4Q91XZ6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb4Q91XZ6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb4Q91XZ6 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb4Q91XZ6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.41■□□□□ 0.86
Pcdhb4Q91XZ6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.41■□□□□ 0.86
Pcdhb4Q91XZ6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb4Q91XZ6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb4Q91XZ6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Pcdhb4Q91XZ6 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb4Q91XZ6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb4Q91XZ6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb4Q91XZ6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb4Q91XZ6 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb4Q91XZ6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb4Q91XZ6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
Pcdhb4Q91XZ6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Pcdhb4Q91XZ6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb4Q91XZ6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb4Q91XZ6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb4Q91XZ6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdhb4Q91XZ6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pcdhb4Q91XZ6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdhb4Q91XZ6 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Pcdhb4Q91XZ6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.39■□□□□ 0.86
Pcdhb4Q91XZ6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.39■□□□□ 0.85
Pcdhb4Q91XZ6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.39■□□□□ 0.85
Pcdhb4Q91XZ6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.39■□□□□ 0.85
Pcdhb4Q91XZ6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhb4Q91XZ6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Pcdhb4Q91XZ6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb4Q91XZ6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhb4Q91XZ6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdhb4Q91XZ6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.38■□□□□ 0.85
Pcdhb4Q91XZ6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb4Q91XZ6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.38■□□□□ 0.85
Pcdhb4Q91XZ6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb4Q91XZ6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb4Q91XZ6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb4Q91XZ6 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.38■□□□□ 0.85
Pcdhb4Q91XZ6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb4Q91XZ6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb4Q91XZ6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb4Q91XZ6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb4Q91XZ6 Gm45444-201ENSMUST00000211394 898 ntBASIC20.37■□□□□ 0.85
Pcdhb4Q91XZ6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb4Q91XZ6 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb4Q91XZ6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.36■□□□□ 0.85
Pcdhb4Q91XZ6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb4Q91XZ6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.36■□□□□ 0.85
Pcdhb4Q91XZ6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pcdhb4Q91XZ6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb4Q91XZ6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb4Q91XZ6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb4Q91XZ6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhb4Q91XZ6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb4Q91XZ6 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb4Q91XZ6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb4Q91XZ6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb4Q91XZ6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb4Q91XZ6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb4Q91XZ6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb4Q91XZ6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb4Q91XZ6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb4Q91XZ6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms