Protein–RNA interactions for Protein: Q8VHI7

Ccdc65, Coiled-coil domain-containing protein 65, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc65Q8VHI7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.78■■□□□ 1.08
Ccdc65Q8VHI7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc65Q8VHI7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Ccdc65Q8VHI7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Ccdc65Q8VHI7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc65Q8VHI7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc65Q8VHI7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ccdc65Q8VHI7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc65Q8VHI7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc65Q8VHI7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc65Q8VHI7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ccdc65Q8VHI7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Ccdc65Q8VHI7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.76■■□□□ 1.07
Ccdc65Q8VHI7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ccdc65Q8VHI7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ccdc65Q8VHI7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc65Q8VHI7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc65Q8VHI7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Ccdc65Q8VHI7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc65Q8VHI7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc65Q8VHI7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
Ccdc65Q8VHI7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc65Q8VHI7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc65Q8VHI7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Ccdc65Q8VHI7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc65Q8VHI7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.74■■□□□ 1.07
Ccdc65Q8VHI7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc65Q8VHI7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc65Q8VHI7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc65Q8VHI7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc65Q8VHI7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc65Q8VHI7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc65Q8VHI7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc65Q8VHI7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc65Q8VHI7 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc65Q8VHI7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ccdc65Q8VHI7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.72■■□□□ 1.07
Ccdc65Q8VHI7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc65Q8VHI7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.72■■□□□ 1.07
Ccdc65Q8VHI7 Gm5812-201ENSMUST00000061073 957 ntBASIC21.72■■□□□ 1.07
Ccdc65Q8VHI7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc65Q8VHI7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ccdc65Q8VHI7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc65Q8VHI7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc65Q8VHI7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.71■■□□□ 1.07
Ccdc65Q8VHI7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.71■■□□□ 1.07
Ccdc65Q8VHI7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc65Q8VHI7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc65Q8VHI7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.71■■□□□ 1.07
Ccdc65Q8VHI7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc65Q8VHI7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc65Q8VHI7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc65Q8VHI7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Ccdc65Q8VHI7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc65Q8VHI7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.69■■□□□ 1.06
Ccdc65Q8VHI7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc65Q8VHI7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ccdc65Q8VHI7 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.69■■□□□ 1.06
Ccdc65Q8VHI7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.69■■□□□ 1.06
Ccdc65Q8VHI7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc65Q8VHI7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ccdc65Q8VHI7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.69■■□□□ 1.06
Ccdc65Q8VHI7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc65Q8VHI7 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc65Q8VHI7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ccdc65Q8VHI7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc65Q8VHI7 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.68■■□□□ 1.06
Ccdc65Q8VHI7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc65Q8VHI7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc65Q8VHI7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc65Q8VHI7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc65Q8VHI7 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc65Q8VHI7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc65Q8VHI7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc65Q8VHI7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc65Q8VHI7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.67■■□□□ 1.06
Ccdc65Q8VHI7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Ccdc65Q8VHI7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc65Q8VHI7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.66■■□□□ 1.06
Ccdc65Q8VHI7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc65Q8VHI7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc65Q8VHI7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc65Q8VHI7 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.66■■□□□ 1.06
Ccdc65Q8VHI7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.66■■□□□ 1.06
Ccdc65Q8VHI7 Gm15820-201ENSMUST00000201566 728 ntBASIC21.66■■□□□ 1.06
Ccdc65Q8VHI7 Gm10399-202ENSMUST00000202768 748 ntBASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms