Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Tdp1Q8BJ37 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.03■■□□□ 1.28
Tdp1Q8BJ37 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Tdp1Q8BJ37 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.03■■□□□ 1.28
Tdp1Q8BJ37 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tdp1Q8BJ37 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tdp1Q8BJ37 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tdp1Q8BJ37 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tdp1Q8BJ37 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
Tdp1Q8BJ37 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Tdp1Q8BJ37 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.02■■□□□ 1.28
Tdp1Q8BJ37 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tdp1Q8BJ37 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tdp1Q8BJ37 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC23.01■■□□□ 1.27
Tdp1Q8BJ37 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tdp1Q8BJ37 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Tdp1Q8BJ37 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.01■■□□□ 1.27
Tdp1Q8BJ37 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.01■■□□□ 1.27
Tdp1Q8BJ37 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tdp1Q8BJ37 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Tdp1Q8BJ37 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Tdp1Q8BJ37 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23■■□□□ 1.27
Tdp1Q8BJ37 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Tdp1Q8BJ37 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Tdp1Q8BJ37 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tdp1Q8BJ37 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tdp1Q8BJ37 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tdp1Q8BJ37 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.99■■□□□ 1.27
Tdp1Q8BJ37 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tdp1Q8BJ37 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.99■■□□□ 1.27
Tdp1Q8BJ37 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tdp1Q8BJ37 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Tdp1Q8BJ37 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC22.98■■□□□ 1.27
Tdp1Q8BJ37 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Tdp1Q8BJ37 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.98■■□□□ 1.27
Tdp1Q8BJ37 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tdp1Q8BJ37 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tdp1Q8BJ37 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Tdp1Q8BJ37 Gm12251-201ENSMUST00000117893 792 ntBASIC22.97■■□□□ 1.27
Tdp1Q8BJ37 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Tdp1Q8BJ37 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tdp1Q8BJ37 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tdp1Q8BJ37 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC22.96■■□□□ 1.27
Tdp1Q8BJ37 Gm43173-201ENSMUST00000202246 593 ntBASIC22.96■■□□□ 1.27
Tdp1Q8BJ37 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tdp1Q8BJ37 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tdp1Q8BJ37 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Tdp1Q8BJ37 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Tdp1Q8BJ37 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Tdp1Q8BJ37 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC22.95■■□□□ 1.26
Tdp1Q8BJ37 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Tdp1Q8BJ37 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC22.95■■□□□ 1.26
Tdp1Q8BJ37 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Tdp1Q8BJ37 AC153962.1-201ENSMUST00000218530 1948 ntBASIC22.94■■□□□ 1.26
Tdp1Q8BJ37 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tdp1Q8BJ37 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Tdp1Q8BJ37 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tdp1Q8BJ37 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tdp1Q8BJ37 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tdp1Q8BJ37 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Tdp1Q8BJ37 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Tdp1Q8BJ37 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Tdp1Q8BJ37 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.93■■□□□ 1.26
Tdp1Q8BJ37 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Tdp1Q8BJ37 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Tdp1Q8BJ37 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Tdp1Q8BJ37 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Tdp1Q8BJ37 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tdp1Q8BJ37 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tdp1Q8BJ37 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tdp1Q8BJ37 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC22.92■■□□□ 1.26
Tdp1Q8BJ37 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tdp1Q8BJ37 Gm43530-201ENSMUST00000195920 274 ntBASIC22.92■■□□□ 1.26
Tdp1Q8BJ37 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Tdp1Q8BJ37 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tdp1Q8BJ37 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tdp1Q8BJ37 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Tdp1Q8BJ37 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.91■■□□□ 1.26
Tdp1Q8BJ37 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Tdp1Q8BJ37 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Tdp1Q8BJ37 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Tdp1Q8BJ37 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.91■■□□□ 1.26
Tdp1Q8BJ37 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Tdp1Q8BJ37 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Tdp1Q8BJ37 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Tdp1Q8BJ37 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Tdp1Q8BJ37 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Tdp1Q8BJ37 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Tdp1Q8BJ37 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.9■■□□□ 1.26
Tdp1Q8BJ37 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Tdp1Q8BJ37 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Tdp1Q8BJ37 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.26
Tdp1Q8BJ37 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Tdp1Q8BJ37 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.89■■□□□ 1.25
Tdp1Q8BJ37 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC22.89■■□□□ 1.25
Tdp1Q8BJ37 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Tdp1Q8BJ37 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Tdp1Q8BJ37 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Tdp1Q8BJ37 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Tdp1Q8BJ37 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms