Protein–RNA interactions for Protein: Q66JY6

Arhgef39, Rho guanine nucleotide exchange factor 39, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef39Q66JY6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Arhgef39Q66JY6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Arhgef39Q66JY6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef39Q66JY6 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Arhgef39Q66JY6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.61■□□□□ 0.57
Arhgef39Q66JY6 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.61■□□□□ 0.57
Arhgef39Q66JY6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef39Q66JY6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Arhgef39Q66JY6 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef39Q66JY6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.61■□□□□ 0.57
Arhgef39Q66JY6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef39Q66JY6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef39Q66JY6 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef39Q66JY6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef39Q66JY6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef39Q66JY6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef39Q66JY6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef39Q66JY6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Arhgef39Q66JY6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Arhgef39Q66JY6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef39Q66JY6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef39Q66JY6 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef39Q66JY6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef39Q66JY6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef39Q66JY6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef39Q66JY6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.59■□□□□ 0.57
Arhgef39Q66JY6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef39Q66JY6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef39Q66JY6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Arhgef39Q66JY6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.58■□□□□ 0.56
Arhgef39Q66JY6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Arhgef39Q66JY6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.58■□□□□ 0.56
Arhgef39Q66JY6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Gm27502-201ENSMUST00000183495 199 ntBASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Arhgef39Q66JY6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.56■□□□□ 0.56
Arhgef39Q66JY6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Arhgef39Q66JY6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Arhgef39Q66JY6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Arhgef39Q66JY6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Arhgef39Q66JY6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Arhgef39Q66JY6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Arhgef39Q66JY6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Arhgef39Q66JY6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.55■□□□□ 0.56
Arhgef39Q66JY6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Arhgef39Q66JY6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Arhgef39Q66JY6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Arhgef39Q66JY6 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Arhgef39Q66JY6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Arhgef39Q66JY6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef39Q66JY6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef39Q66JY6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef39Q66JY6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef39Q66JY6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef39Q66JY6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef39Q66JY6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef39Q66JY6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.54■□□□□ 0.56
Arhgef39Q66JY6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef39Q66JY6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Arhgef39Q66JY6 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Arhgef39Q66JY6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef39Q66JY6 Gm14523-201ENSMUST00000117260 558 ntBASIC18.53■□□□□ 0.56
Arhgef39Q66JY6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef39Q66JY6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef39Q66JY6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Arhgef39Q66JY6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Arhgef39Q66JY6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef39Q66JY6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef39Q66JY6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef39Q66JY6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Arhgef39Q66JY6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms