Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctla4P09793 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ctla4P09793 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla4P09793 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ctla4P09793 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla4P09793 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla4P09793 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.19■□□□□ 0.66
Ctla4P09793 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ctla4P09793 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ctla4P09793 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctla4P09793 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctla4P09793 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ctla4P09793 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ctla4P09793 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ctla4P09793 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ctla4P09793 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctla4P09793 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ctla4P09793 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.17■□□□□ 0.66
Ctla4P09793 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctla4P09793 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctla4P09793 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
Ctla4P09793 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.17■□□□□ 0.66
Ctla4P09793 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ctla4P09793 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.17■□□□□ 0.66
Ctla4P09793 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ctla4P09793 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ctla4P09793 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla4P09793 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla4P09793 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla4P09793 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla4P09793 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla4P09793 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla4P09793 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla4P09793 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ctla4P09793 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ctla4P09793 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.15■□□□□ 0.66
Ctla4P09793 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ctla4P09793 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ctla4P09793 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ctla4P09793 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Ctla4P09793 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Ctla4P09793 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ctla4P09793 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ctla4P09793 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ctla4P09793 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.14■□□□□ 0.65
Ctla4P09793 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctla4P09793 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ctla4P09793 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctla4P09793 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctla4P09793 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctla4P09793 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctla4P09793 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.13■□□□□ 0.65
Ctla4P09793 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.13■□□□□ 0.65
Ctla4P09793 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctla4P09793 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ctla4P09793 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.13■□□□□ 0.65
Ctla4P09793 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ctla4P09793 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctla4P09793 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ctla4P09793 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctla4P09793 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctla4P09793 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctla4P09793 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ctla4P09793 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ctla4P09793 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.12■□□□□ 0.65
Ctla4P09793 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.12■□□□□ 0.65
Ctla4P09793 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.12■□□□□ 0.65
Ctla4P09793 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
Ctla4P09793 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctla4P09793 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ctla4P09793 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctla4P09793 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctla4P09793 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ctla4P09793 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.11■□□□□ 0.65
Ctla4P09793 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ctla4P09793 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctla4P09793 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctla4P09793 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Ctla4P09793 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctla4P09793 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctla4P09793 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctla4P09793 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.11■□□□□ 0.65
Ctla4P09793 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctla4P09793 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Ctla4P09793 Gm9847-201ENSMUST00000052528 599 ntBASIC19.11■□□□□ 0.65
Ctla4P09793 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctla4P09793 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ctla4P09793 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
Ctla4P09793 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ctla4P09793 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctla4P09793 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctla4P09793 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.1■□□□□ 0.65
Ctla4P09793 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctla4P09793 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctla4P09793 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ctla4P09793 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ctla4P09793 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ctla4P09793 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.09■□□□□ 0.65
Ctla4P09793 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ctla4P09793 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms