Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SncaO55042 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.01■□□□□ 0.31
SncaO55042 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.01■□□□□ 0.31
SncaO55042 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SncaO55042 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SncaO55042 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SncaO55042 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SncaO55042 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.01■□□□□ 0.31
SncaO55042 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SncaO55042 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SncaO55042 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SncaO55042 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SncaO55042 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SncaO55042 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SncaO55042 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SncaO55042 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17■□□□□ 0.31
SncaO55042 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SncaO55042 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17■□□□□ 0.31
SncaO55042 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17■□□□□ 0.31
SncaO55042 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17■□□□□ 0.31
SncaO55042 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SncaO55042 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SncaO55042 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17■□□□□ 0.31
SncaO55042 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SncaO55042 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SncaO55042 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SncaO55042 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SncaO55042 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SncaO55042 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.99■□□□□ 0.31
SncaO55042 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SncaO55042 Gm11175-201ENSMUST00000116172 543 ntBASIC16.99■□□□□ 0.31
SncaO55042 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.99■□□□□ 0.31
SncaO55042 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.99■□□□□ 0.31
SncaO55042 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
SncaO55042 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SncaO55042 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SncaO55042 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SncaO55042 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SncaO55042 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.98■□□□□ 0.31
SncaO55042 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SncaO55042 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SncaO55042 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SncaO55042 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SncaO55042 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SncaO55042 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SncaO55042 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SncaO55042 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SncaO55042 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SncaO55042 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SncaO55042 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SncaO55042 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.97■□□□□ 0.31
SncaO55042 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SncaO55042 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SncaO55042 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.97■□□□□ 0.31
SncaO55042 AC116713.1-201ENSMUST00000215074 430 ntBASIC16.97■□□□□ 0.31
SncaO55042 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SncaO55042 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SncaO55042 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SncaO55042 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.96■□□□□ 0.31
SncaO55042 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SncaO55042 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SncaO55042 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SncaO55042 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SncaO55042 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.96■□□□□ 0.31
SncaO55042 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.96■□□□□ 0.31
SncaO55042 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.96■□□□□ 0.31
SncaO55042 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SncaO55042 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
SncaO55042 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SncaO55042 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SncaO55042 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SncaO55042 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.96■□□□□ 0.3
SncaO55042 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SncaO55042 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SncaO55042 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SncaO55042 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SncaO55042 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SncaO55042 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.95■□□□□ 0.3
SncaO55042 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SncaO55042 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SncaO55042 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SncaO55042 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SncaO55042 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SncaO55042 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SncaO55042 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SncaO55042 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.94■□□□□ 0.3
SncaO55042 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SncaO55042 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SncaO55042 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SncaO55042 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SncaO55042 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.94■□□□□ 0.3
SncaO55042 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SncaO55042 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SncaO55042 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SncaO55042 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SncaO55042 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SncaO55042 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SncaO55042 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.93■□□□□ 0.3
SncaO55042 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.93■□□□□ 0.3
SncaO55042 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms