Protein–RNA interactions for Protein: O35114

Scarb2, Lysosome membrane protein 2, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2O35114 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scarb2O35114 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.26■□□□□ 0.67
Scarb2O35114 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.26■□□□□ 0.67
Scarb2O35114 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarb2O35114 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarb2O35114 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarb2O35114 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarb2O35114 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scarb2O35114 Gm43566-201ENSMUST00000196851 808 ntBASIC19.25■□□□□ 0.67
Scarb2O35114 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scarb2O35114 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scarb2O35114 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scarb2O35114 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.24■□□□□ 0.67
Scarb2O35114 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scarb2O35114 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scarb2O35114 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Scarb2O35114 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scarb2O35114 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scarb2O35114 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb2O35114 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb2O35114 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb2O35114 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb2O35114 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb2O35114 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb2O35114 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb2O35114 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb2O35114 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Scarb2O35114 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Scarb2O35114 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb2O35114 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Scarb2O35114 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scarb2O35114 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scarb2O35114 Gm13238-201ENSMUST00000117655 780 ntBASIC19.22■□□□□ 0.67
Scarb2O35114 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scarb2O35114 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.22■□□□□ 0.67
Scarb2O35114 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Scarb2O35114 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.22■□□□□ 0.67
Scarb2O35114 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Scarb2O35114 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Scarb2O35114 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.22■□□□□ 0.67
Scarb2O35114 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Scarb2O35114 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarb2O35114 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarb2O35114 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarb2O35114 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Scarb2O35114 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.21■□□□□ 0.67
Scarb2O35114 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarb2O35114 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarb2O35114 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarb2O35114 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Scarb2O35114 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Scarb2O35114 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Scarb2O35114 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scarb2O35114 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scarb2O35114 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scarb2O35114 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scarb2O35114 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scarb2O35114 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Scarb2O35114 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scarb2O35114 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Scarb2O35114 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scarb2O35114 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scarb2O35114 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scarb2O35114 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Scarb2O35114 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scarb2O35114 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.18■□□□□ 0.66
Scarb2O35114 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scarb2O35114 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Scarb2O35114 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scarb2O35114 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scarb2O35114 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scarb2O35114 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scarb2O35114 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scarb2O35114 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scarb2O35114 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scarb2O35114 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scarb2O35114 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scarb2O35114 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scarb2O35114 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scarb2O35114 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.16■□□□□ 0.66
Scarb2O35114 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scarb2O35114 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scarb2O35114 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.16■□□□□ 0.66
Scarb2O35114 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scarb2O35114 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scarb2O35114 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarb2O35114 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarb2O35114 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarb2O35114 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scarb2O35114 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarb2O35114 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.15■□□□□ 0.66
Scarb2O35114 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scarb2O35114 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarb2O35114 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarb2O35114 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarb2O35114 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Scarb2O35114 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Scarb2O35114 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarb2O35114 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scarb2O35114 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms