Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Smad6-203ENSMUST00000179458 273 ntBASIC10.33□□□□□ -0.76
Rnf213E9Q555 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC10.33□□□□□ -0.76
Rnf213E9Q555 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf213E9Q555 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf213E9Q555 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Rnf213E9Q555 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf213E9Q555 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC10.33□□□□□ -0.76
Rnf213E9Q555 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf213E9Q555 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf213E9Q555 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC10.33□□□□□ -0.76
Rnf213E9Q555 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Rnf213E9Q555 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC10.32□□□□□ -0.76
Rnf213E9Q555 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC10.32□□□□□ -0.76
Rnf213E9Q555 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf213E9Q555 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC10.31□□□□□ -0.76
Rnf213E9Q555 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC10.31□□□□□ -0.76
Rnf213E9Q555 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf213E9Q555 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Rnf213E9Q555 Gm12527-201ENSMUST00000117967 564 ntBASIC10.31□□□□□ -0.76
Rnf213E9Q555 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Rnf213E9Q555 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC10.3□□□□□ -0.76
Rnf213E9Q555 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Rnf213E9Q555 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf213E9Q555 AC122428.3-201ENSMUST00000215551 2290 ntBASIC10.3□□□□□ -0.76
Rnf213E9Q555 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf213E9Q555 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf213E9Q555 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Rnf213E9Q555 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf213E9Q555 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Rnf213E9Q555 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf213E9Q555 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Rnf213E9Q555 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf213E9Q555 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
Rnf213E9Q555 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC10.29□□□□□ -0.76
Rnf213E9Q555 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Rnf213E9Q555 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf213E9Q555 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf213E9Q555 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC10.29□□□□□ -0.76
Rnf213E9Q555 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf213E9Q555 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC10.29□□□□□ -0.76
Rnf213E9Q555 Gm12441-201ENSMUST00000121806 588 ntBASIC10.29□□□□□ -0.76
Rnf213E9Q555 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rnf213E9Q555 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC10.29□□□□□ -0.76
Rnf213E9Q555 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Rnf213E9Q555 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf213E9Q555 Gm4968-201ENSMUST00000071458 858 ntBASIC10.28□□□□□ -0.76
Rnf213E9Q555 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Rnf213E9Q555 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Rnf213E9Q555 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC10.28□□□□□ -0.76
Rnf213E9Q555 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC10.28□□□□□ -0.76
Rnf213E9Q555 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC10.28□□□□□ -0.76
Rnf213E9Q555 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf213E9Q555 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC10.28□□□□□ -0.76
Rnf213E9Q555 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf213E9Q555 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf213E9Q555 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rnf213E9Q555 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf213E9Q555 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Rnf213E9Q555 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.76
Rnf213E9Q555 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.76
Rnf213E9Q555 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rnf213E9Q555 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf213E9Q555 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Rnf213E9Q555 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf213E9Q555 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Rnf213E9Q555 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf213E9Q555 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf213E9Q555 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rnf213E9Q555 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC10.27□□□□□ -0.77
Rnf213E9Q555 Gm20760-201ENSMUST00000179197 648 ntBASIC10.26□□□□□ -0.77
Rnf213E9Q555 Gm42555-201ENSMUST00000199304 1039 ntBASIC10.26□□□□□ -0.77
Rnf213E9Q555 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf213E9Q555 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf213E9Q555 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf213E9Q555 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf213E9Q555 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf213E9Q555 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf213E9Q555 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf213E9Q555 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf213E9Q555 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf213E9Q555 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Rnf213E9Q555 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC10.26□□□□□ -0.77
Rnf213E9Q555 Gm7143-201ENSMUST00000222811 859 ntBASIC10.26□□□□□ -0.77
Rnf213E9Q555 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf213E9Q555 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf213E9Q555 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms