Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Herc1E9PZP8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Herc1E9PZP8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Herc1E9PZP8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Herc1E9PZP8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.09□□□□□ -0.47
Herc1E9PZP8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Gm27741-201ENSMUST00000185060 237 ntBASIC12.08□□□□□ -0.48
Herc1E9PZP8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.08□□□□□ -0.48
Herc1E9PZP8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.08□□□□□ -0.48
Herc1E9PZP8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Gm11643-201ENSMUST00000119578 864 ntBASIC12.08□□□□□ -0.48
Herc1E9PZP8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Mir5133-201ENSMUST00000174955 77 ntBASIC12.08□□□□□ -0.48
Herc1E9PZP8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.07□□□□□ -0.48
Herc1E9PZP8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.06□□□□□ -0.48
Herc1E9PZP8 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.06□□□□□ -0.48
Herc1E9PZP8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Fezf2-202ENSMUST00000224023 1917 ntBASIC12.05□□□□□ -0.48
Herc1E9PZP8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.05□□□□□ -0.48
Herc1E9PZP8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Herc1E9PZP8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.04□□□□□ -0.48
Herc1E9PZP8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Gm18101-201ENSMUST00000215769 548 ntBASIC12.04□□□□□ -0.48
Herc1E9PZP8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Herc1E9PZP8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC12.03□□□□□ -0.48
Herc1E9PZP8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.03□□□□□ -0.48
Herc1E9PZP8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Herc1E9PZP8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Herc1E9PZP8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Herc1E9PZP8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Herc1E9PZP8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.02□□□□□ -0.48
Herc1E9PZP8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Herc1E9PZP8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Herc1E9PZP8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 136.7 ms