Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Herc1E9PZP8 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Herc1E9PZP8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Herc1E9PZP8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Herc1E9PZP8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.09□□□□□ -0.47
Herc1E9PZP8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Gm27741-201ENSMUST00000185060 237 ntBASIC12.08□□□□□ -0.48
Herc1E9PZP8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.08□□□□□ -0.48
Herc1E9PZP8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.08□□□□□ -0.48
Herc1E9PZP8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Gm11643-201ENSMUST00000119578 864 ntBASIC12.08□□□□□ -0.48
Herc1E9PZP8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Mir5133-201ENSMUST00000174955 77 ntBASIC12.08□□□□□ -0.48
Herc1E9PZP8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Herc1E9PZP8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.07□□□□□ -0.48
Herc1E9PZP8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Herc1E9PZP8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.06□□□□□ -0.48
Herc1E9PZP8 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.06□□□□□ -0.48
Herc1E9PZP8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Herc1E9PZP8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Fezf2-202ENSMUST00000224023 1917 ntBASIC12.05□□□□□ -0.48
Herc1E9PZP8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.05□□□□□ -0.48
Herc1E9PZP8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Herc1E9PZP8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Herc1E9PZP8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.04□□□□□ -0.48
Herc1E9PZP8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Gm18101-201ENSMUST00000215769 548 ntBASIC12.04□□□□□ -0.48
Herc1E9PZP8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Herc1E9PZP8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Herc1E9PZP8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC12.03□□□□□ -0.48
Herc1E9PZP8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.03□□□□□ -0.48
Herc1E9PZP8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Herc1E9PZP8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Herc1E9PZP8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Herc1E9PZP8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Herc1E9PZP8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Herc1E9PZP8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC12.02□□□□□ -0.48
Herc1E9PZP8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Herc1E9PZP8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Herc1E9PZP8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 132.7 ms