Protein–RNA interactions for Protein: A0A1L1SQF0

Uncharacterized protein (Fragment), mousemouse

Predictions only

Length 893 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1L1SQF0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
A0A1L1SQF0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
A0A1L1SQF0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
A0A1L1SQF0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
A0A1L1SQF0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
A0A1L1SQF0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
A0A1L1SQF0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
A0A1L1SQF0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
A0A1L1SQF0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.26■■□□□ 1.31
A0A1L1SQF0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
A0A1L1SQF0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
A0A1L1SQF0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
A0A1L1SQF0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
A0A1L1SQF0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
A0A1L1SQF0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
A0A1L1SQF0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
A0A1L1SQF0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
A0A1L1SQF0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
A0A1L1SQF0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
A0A1L1SQF0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC23.25■■□□□ 1.31
A0A1L1SQF0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
A0A1L1SQF0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC23.25■■□□□ 1.31
A0A1L1SQF0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC23.25■■□□□ 1.31
A0A1L1SQF0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
A0A1L1SQF0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
A0A1L1SQF0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
A0A1L1SQF0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
A0A1L1SQF0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
A0A1L1SQF0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
A0A1L1SQF0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.23■■□□□ 1.31
A0A1L1SQF0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
A0A1L1SQF0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
A0A1L1SQF0 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
A0A1L1SQF0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
A0A1L1SQF0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
A0A1L1SQF0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
A0A1L1SQF0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.22■■□□□ 1.31
A0A1L1SQF0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.22■■□□□ 1.31
A0A1L1SQF0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
A0A1L1SQF0 Gm28536-201ENSMUST00000190971 1317 ntBASIC23.22■■□□□ 1.31
A0A1L1SQF0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
A0A1L1SQF0 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
A0A1L1SQF0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
A0A1L1SQF0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
A0A1L1SQF0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
A0A1L1SQF0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
A0A1L1SQF0 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
A0A1L1SQF0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
A0A1L1SQF0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
A0A1L1SQF0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
A0A1L1SQF0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
A0A1L1SQF0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
A0A1L1SQF0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
A0A1L1SQF0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
A0A1L1SQF0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
A0A1L1SQF0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
A0A1L1SQF0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
A0A1L1SQF0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
A0A1L1SQF0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
A0A1L1SQF0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
A0A1L1SQF0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
A0A1L1SQF0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.2■■□□□ 1.3
A0A1L1SQF0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
A0A1L1SQF0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
A0A1L1SQF0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
A0A1L1SQF0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
A0A1L1SQF0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
A0A1L1SQF0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
A0A1L1SQF0 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
A0A1L1SQF0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
A0A1L1SQF0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
A0A1L1SQF0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
A0A1L1SQF0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
A0A1L1SQF0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
A0A1L1SQF0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
A0A1L1SQF0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
A0A1L1SQF0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
A0A1L1SQF0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
A0A1L1SQF0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
A0A1L1SQF0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
A0A1L1SQF0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
A0A1L1SQF0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
A0A1L1SQF0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
A0A1L1SQF0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
A0A1L1SQF0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.16■■□□□ 1.3
A0A1L1SQF0 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
A0A1L1SQF0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
A0A1L1SQF0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC23.15■■□□□ 1.3
A0A1L1SQF0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
A0A1L1SQF0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
A0A1L1SQF0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
A0A1L1SQF0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
A0A1L1SQF0 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.15■■□□□ 1.3
A0A1L1SQF0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
A0A1L1SQF0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
A0A1L1SQF0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
A0A1L1SQF0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
A0A1L1SQF0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
A0A1L1SQF0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.14■■□□□ 1.29
A0A1L1SQF0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms