Protein–RNA interactions for Protein: A0A140T8R2

Vma21-ps, Vacuolar ATPase assembly integral membrane protein VMA21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21-psA0A140T8R2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vma21-psA0A140T8R2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vma21-psA0A140T8R2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vma21-psA0A140T8R2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vma21-psA0A140T8R2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vma21-psA0A140T8R2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vma21-psA0A140T8R2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vma21-psA0A140T8R2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Vma21-psA0A140T8R2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vma21-psA0A140T8R2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Vma21-psA0A140T8R2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vma21-psA0A140T8R2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vma21-psA0A140T8R2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Vma21-psA0A140T8R2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vma21-psA0A140T8R2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vma21-psA0A140T8R2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.45■□□□□ 0.22
Vma21-psA0A140T8R2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vma21-psA0A140T8R2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vma21-psA0A140T8R2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.44■□□□□ 0.22
Vma21-psA0A140T8R2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vma21-psA0A140T8R2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vma21-psA0A140T8R2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vma21-psA0A140T8R2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vma21-psA0A140T8R2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vma21-psA0A140T8R2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vma21-psA0A140T8R2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.43■□□□□ 0.22
Vma21-psA0A140T8R2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vma21-psA0A140T8R2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vma21-psA0A140T8R2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vma21-psA0A140T8R2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vma21-psA0A140T8R2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vma21-psA0A140T8R2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
Vma21-psA0A140T8R2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Vma21-psA0A140T8R2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.42■□□□□ 0.22
Vma21-psA0A140T8R2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vma21-psA0A140T8R2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vma21-psA0A140T8R2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vma21-psA0A140T8R2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vma21-psA0A140T8R2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vma21-psA0A140T8R2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vma21-psA0A140T8R2 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vma21-psA0A140T8R2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vma21-psA0A140T8R2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Vma21-psA0A140T8R2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vma21-psA0A140T8R2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vma21-psA0A140T8R2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vma21-psA0A140T8R2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vma21-psA0A140T8R2 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.41■□□□□ 0.22
Vma21-psA0A140T8R2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vma21-psA0A140T8R2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vma21-psA0A140T8R2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vma21-psA0A140T8R2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vma21-psA0A140T8R2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vma21-psA0A140T8R2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vma21-psA0A140T8R2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vma21-psA0A140T8R2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vma21-psA0A140T8R2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.39■□□□□ 0.21
Vma21-psA0A140T8R2 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vma21-psA0A140T8R2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vma21-psA0A140T8R2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vma21-psA0A140T8R2 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vma21-psA0A140T8R2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vma21-psA0A140T8R2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Vma21-psA0A140T8R2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vma21-psA0A140T8R2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.38■□□□□ 0.21
Vma21-psA0A140T8R2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vma21-psA0A140T8R2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vma21-psA0A140T8R2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vma21-psA0A140T8R2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Vma21-psA0A140T8R2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vma21-psA0A140T8R2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vma21-psA0A140T8R2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vma21-psA0A140T8R2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vma21-psA0A140T8R2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Vma21-psA0A140T8R2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vma21-psA0A140T8R2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vma21-psA0A140T8R2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vma21-psA0A140T8R2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Vma21-psA0A140T8R2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vma21-psA0A140T8R2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vma21-psA0A140T8R2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms