Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-5A0A0G2JFX6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-5A0A0G2JFX6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7-5A0A0G2JFX6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Trav7-5A0A0G2JFX6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-5A0A0G2JFX6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-5A0A0G2JFX6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-5A0A0G2JFX6 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-5A0A0G2JFX6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav7-5A0A0G2JFX6 Gm7417-201ENSMUST00000192950 473 ntBASIC16.21■□□□□ 0.19
Trav7-5A0A0G2JFX6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.21■□□□□ 0.19
Trav7-5A0A0G2JFX6 Rps24-207ENSMUST00000224568 714 ntBASIC16.21■□□□□ 0.19
Trav7-5A0A0G2JFX6 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.21■□□□□ 0.19
Trav7-5A0A0G2JFX6 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-5A0A0G2JFX6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7-5A0A0G2JFX6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav7-5A0A0G2JFX6 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-5A0A0G2JFX6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-5A0A0G2JFX6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav7-5A0A0G2JFX6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-5A0A0G2JFX6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav7-5A0A0G2JFX6 Etf1-202ENSMUST00000180351 108 ntBASIC16.2■□□□□ 0.18
Trav7-5A0A0G2JFX6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7-5A0A0G2JFX6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.2■□□□□ 0.18
Trav7-5A0A0G2JFX6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
Trav7-5A0A0G2JFX6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-5A0A0G2JFX6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trav7-5A0A0G2JFX6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-5A0A0G2JFX6 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-5A0A0G2JFX6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-5A0A0G2JFX6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-5A0A0G2JFX6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-5A0A0G2JFX6 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-5A0A0G2JFX6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7-5A0A0G2JFX6 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.19■□□□□ 0.18
Trav7-5A0A0G2JFX6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.19■□□□□ 0.18
Trav7-5A0A0G2JFX6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav7-5A0A0G2JFX6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-5A0A0G2JFX6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-5A0A0G2JFX6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-5A0A0G2JFX6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-5A0A0G2JFX6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav7-5A0A0G2JFX6 Gm45102-201ENSMUST00000207427 857 ntBASIC16.18■□□□□ 0.18
Trav7-5A0A0G2JFX6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav7-5A0A0G2JFX6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-5A0A0G2JFX6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-5A0A0G2JFX6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-5A0A0G2JFX6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7-5A0A0G2JFX6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-5A0A0G2JFX6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-5A0A0G2JFX6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav7-5A0A0G2JFX6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.17■□□□□ 0.18
Trav7-5A0A0G2JFX6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-5A0A0G2JFX6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav7-5A0A0G2JFX6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.17■□□□□ 0.18
Trav7-5A0A0G2JFX6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-5A0A0G2JFX6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7-5A0A0G2JFX6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav7-5A0A0G2JFX6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7-5A0A0G2JFX6 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav7-5A0A0G2JFX6 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Trav7-5A0A0G2JFX6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7-5A0A0G2JFX6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.16■□□□□ 0.18
Trav7-5A0A0G2JFX6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav7-5A0A0G2JFX6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.16■□□□□ 0.18
Trav7-5A0A0G2JFX6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav7-5A0A0G2JFX6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Gm9959-201ENSMUST00000068277 390 ntBASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7-5A0A0G2JFX6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-5A0A0G2JFX6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trav7-5A0A0G2JFX6 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.14■□□□□ 0.17
Trav7-5A0A0G2JFX6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trav7-5A0A0G2JFX6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-5A0A0G2JFX6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-5A0A0G2JFX6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-5A0A0G2JFX6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-5A0A0G2JFX6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7-5A0A0G2JFX6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-5A0A0G2JFX6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-5A0A0G2JFX6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-5A0A0G2JFX6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-5A0A0G2JFX6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav7-5A0A0G2JFX6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-5A0A0G2JFX6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-5A0A0G2JFX6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Trav7-5A0A0G2JFX6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms