Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav5-1A0A075B5Z7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trav5-1A0A075B5Z7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav5-1A0A075B5Z7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav5-1A0A075B5Z7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trav5-1A0A075B5Z7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.8■□□□□ 0.44
Trav5-1A0A075B5Z7 Golgb1-201ENSMUST00000023534 498 ntBASIC17.8■□□□□ 0.44
Trav5-1A0A075B5Z7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav5-1A0A075B5Z7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav5-1A0A075B5Z7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav5-1A0A075B5Z7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trav5-1A0A075B5Z7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav5-1A0A075B5Z7 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.79■□□□□ 0.44
Trav5-1A0A075B5Z7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trav5-1A0A075B5Z7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Trav5-1A0A075B5Z7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav5-1A0A075B5Z7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav5-1A0A075B5Z7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav5-1A0A075B5Z7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav5-1A0A075B5Z7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav5-1A0A075B5Z7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav5-1A0A075B5Z7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-1A0A075B5Z7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-1A0A075B5Z7 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-1A0A075B5Z7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-1A0A075B5Z7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-1A0A075B5Z7 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-1A0A075B5Z7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.78■□□□□ 0.44
Trav5-1A0A075B5Z7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.78■□□□□ 0.44
Trav5-1A0A075B5Z7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-1A0A075B5Z7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-1A0A075B5Z7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav5-1A0A075B5Z7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trav5-1A0A075B5Z7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav5-1A0A075B5Z7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav5-1A0A075B5Z7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav5-1A0A075B5Z7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav5-1A0A075B5Z7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Trav5-1A0A075B5Z7 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav5-1A0A075B5Z7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.77■□□□□ 0.44
Trav5-1A0A075B5Z7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav5-1A0A075B5Z7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav5-1A0A075B5Z7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav5-1A0A075B5Z7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav5-1A0A075B5Z7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
Trav5-1A0A075B5Z7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav5-1A0A075B5Z7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav5-1A0A075B5Z7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav5-1A0A075B5Z7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav5-1A0A075B5Z7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav5-1A0A075B5Z7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Trav5-1A0A075B5Z7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav5-1A0A075B5Z7 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.75■□□□□ 0.43
Trav5-1A0A075B5Z7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5-1A0A075B5Z7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5-1A0A075B5Z7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5-1A0A075B5Z7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5-1A0A075B5Z7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5-1A0A075B5Z7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5-1A0A075B5Z7 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5-1A0A075B5Z7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav5-1A0A075B5Z7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav5-1A0A075B5Z7 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.75■□□□□ 0.43
Trav5-1A0A075B5Z7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav5-1A0A075B5Z7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav5-1A0A075B5Z7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-1A0A075B5Z7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-1A0A075B5Z7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-1A0A075B5Z7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.74■□□□□ 0.43
Trav5-1A0A075B5Z7 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-1A0A075B5Z7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-1A0A075B5Z7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav5-1A0A075B5Z7 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav5-1A0A075B5Z7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Trav5-1A0A075B5Z7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav5-1A0A075B5Z7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5-1A0A075B5Z7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5-1A0A075B5Z7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.73■□□□□ 0.43
Trav5-1A0A075B5Z7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav5-1A0A075B5Z7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
Trav5-1A0A075B5Z7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav5-1A0A075B5Z7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav5-1A0A075B5Z7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.72■□□□□ 0.43
Trav5-1A0A075B5Z7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-1A0A075B5Z7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-1A0A075B5Z7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-1A0A075B5Z7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-1A0A075B5Z7 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
Trav5-1A0A075B5Z7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-1A0A075B5Z7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-1A0A075B5Z7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav5-1A0A075B5Z7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5-1A0A075B5Z7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav5-1A0A075B5Z7 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.71■□□□□ 0.43
Trav5-1A0A075B5Z7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5-1A0A075B5Z7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav5-1A0A075B5Z7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trav5-1A0A075B5Z7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trav5-1A0A075B5Z7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav5-1A0A075B5Z7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 194.2 ms