Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cldn9Q9Z0S7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn9Q9Z0S7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn9Q9Z0S7 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn9Q9Z0S7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn9Q9Z0S7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cldn9Q9Z0S7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn9Q9Z0S7 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn9Q9Z0S7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn9Q9Z0S7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn9Q9Z0S7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn9Q9Z0S7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Cldn9Q9Z0S7 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn9Q9Z0S7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cldn9Q9Z0S7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Cldn9Q9Z0S7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cldn9Q9Z0S7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn9Q9Z0S7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn9Q9Z0S7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn9Q9Z0S7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn9Q9Z0S7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn9Q9Z0S7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.99■□□□□ 0.79
Cldn9Q9Z0S7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Cldn9Q9Z0S7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.99■□□□□ 0.79
Cldn9Q9Z0S7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Cldn9Q9Z0S7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn9Q9Z0S7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.99■□□□□ 0.79
Cldn9Q9Z0S7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn9Q9Z0S7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn9Q9Z0S7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn9Q9Z0S7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Cldn9Q9Z0S7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn9Q9Z0S7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldn9Q9Z0S7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cldn9Q9Z0S7 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.98■□□□□ 0.79
Cldn9Q9Z0S7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn9Q9Z0S7 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn9Q9Z0S7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn9Q9Z0S7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldn9Q9Z0S7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn9Q9Z0S7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cldn9Q9Z0S7 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Cldn9Q9Z0S7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn9Q9Z0S7 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn9Q9Z0S7 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldn9Q9Z0S7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.96■□□□□ 0.79
Cldn9Q9Z0S7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.96■□□□□ 0.79
Cldn9Q9Z0S7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn9Q9Z0S7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn9Q9Z0S7 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn9Q9Z0S7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn9Q9Z0S7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn9Q9Z0S7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn9Q9Z0S7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn9Q9Z0S7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn9Q9Z0S7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldn9Q9Z0S7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn9Q9Z0S7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn9Q9Z0S7 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn9Q9Z0S7 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn9Q9Z0S7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cldn9Q9Z0S7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn9Q9Z0S7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn9Q9Z0S7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn9Q9Z0S7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn9Q9Z0S7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.94■□□□□ 0.78
Cldn9Q9Z0S7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldn9Q9Z0S7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn9Q9Z0S7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn9Q9Z0S7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
Cldn9Q9Z0S7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn9Q9Z0S7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.93■□□□□ 0.78
Cldn9Q9Z0S7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn9Q9Z0S7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn9Q9Z0S7 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn9Q9Z0S7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn9Q9Z0S7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cldn9Q9Z0S7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn9Q9Z0S7 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldn9Q9Z0S7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cldn9Q9Z0S7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cldn9Q9Z0S7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn9Q9Z0S7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn9Q9Z0S7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cldn9Q9Z0S7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn9Q9Z0S7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.92■□□□□ 0.78
Cldn9Q9Z0S7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
Cldn9Q9Z0S7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cldn9Q9Z0S7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn9Q9Z0S7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn9Q9Z0S7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldn9Q9Z0S7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn9Q9Z0S7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn9Q9Z0S7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn9Q9Z0S7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn9Q9Z0S7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn9Q9Z0S7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn9Q9Z0S7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldn9Q9Z0S7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cldn9Q9Z0S7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms