Protein–RNA interactions for Protein: Q9Z0E3

Aire, Autoimmune regulator, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AireQ9Z0E3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
AireQ9Z0E3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AireQ9Z0E3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AireQ9Z0E3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AireQ9Z0E3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AireQ9Z0E3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AireQ9Z0E3 Iqck-206ENSMUST00000208658 2891 ntBASIC18.4■□□□□ 0.54
AireQ9Z0E3 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
AireQ9Z0E3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
AireQ9Z0E3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
AireQ9Z0E3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AireQ9Z0E3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AireQ9Z0E3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AireQ9Z0E3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
AireQ9Z0E3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AireQ9Z0E3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AireQ9Z0E3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AireQ9Z0E3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AireQ9Z0E3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.38■□□□□ 0.53
AireQ9Z0E3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AireQ9Z0E3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AireQ9Z0E3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AireQ9Z0E3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
AireQ9Z0E3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AireQ9Z0E3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC18.38■□□□□ 0.53
AireQ9Z0E3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
AireQ9Z0E3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AireQ9Z0E3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.37■□□□□ 0.53
AireQ9Z0E3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
AireQ9Z0E3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.37■□□□□ 0.53
AireQ9Z0E3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
AireQ9Z0E3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
AireQ9Z0E3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
AireQ9Z0E3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
AireQ9Z0E3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AireQ9Z0E3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.36■□□□□ 0.53
AireQ9Z0E3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
AireQ9Z0E3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
AireQ9Z0E3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.36■□□□□ 0.53
AireQ9Z0E3 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.36■□□□□ 0.53
AireQ9Z0E3 Gm45102-201ENSMUST00000207427 857 ntBASIC18.36■□□□□ 0.53
AireQ9Z0E3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.36■□□□□ 0.53
AireQ9Z0E3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AireQ9Z0E3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
AireQ9Z0E3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AireQ9Z0E3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AireQ9Z0E3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AireQ9Z0E3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AireQ9Z0E3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AireQ9Z0E3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
AireQ9Z0E3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
AireQ9Z0E3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.35■□□□□ 0.53
AireQ9Z0E3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
AireQ9Z0E3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
AireQ9Z0E3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
AireQ9Z0E3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AireQ9Z0E3 Gm15039-201ENSMUST00000118914 875 ntBASIC18.34■□□□□ 0.53
AireQ9Z0E3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
AireQ9Z0E3 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.34■□□□□ 0.53
AireQ9Z0E3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
AireQ9Z0E3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AireQ9Z0E3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
AireQ9Z0E3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
AireQ9Z0E3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.34■□□□□ 0.53
AireQ9Z0E3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AireQ9Z0E3 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.33■□□□□ 0.53
AireQ9Z0E3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
AireQ9Z0E3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.33■□□□□ 0.52
AireQ9Z0E3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AireQ9Z0E3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
AireQ9Z0E3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
AireQ9Z0E3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
AireQ9Z0E3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
AireQ9Z0E3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
AireQ9Z0E3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AireQ9Z0E3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AireQ9Z0E3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
AireQ9Z0E3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AireQ9Z0E3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
AireQ9Z0E3 Gm14117-201ENSMUST00000122417 843 ntBASIC18.32■□□□□ 0.52
AireQ9Z0E3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AireQ9Z0E3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
AireQ9Z0E3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
AireQ9Z0E3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
AireQ9Z0E3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AireQ9Z0E3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
AireQ9Z0E3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AireQ9Z0E3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AireQ9Z0E3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AireQ9Z0E3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AireQ9Z0E3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.31■□□□□ 0.52
AireQ9Z0E3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AireQ9Z0E3 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.31■□□□□ 0.52
AireQ9Z0E3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
AireQ9Z0E3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AireQ9Z0E3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AireQ9Z0E3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
AireQ9Z0E3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AireQ9Z0E3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
AireQ9Z0E3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 163.9 ms