Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssmem1Q9D9Y8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssmem1Q9D9Y8 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssmem1Q9D9Y8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Ssmem1Q9D9Y8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssmem1Q9D9Y8 Gm22238-201ENSMUST00000175222 88 ntBASIC17.96■□□□□ 0.47
Ssmem1Q9D9Y8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssmem1Q9D9Y8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ssmem1Q9D9Y8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ssmem1Q9D9Y8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ssmem1Q9D9Y8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssmem1Q9D9Y8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ssmem1Q9D9Y8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssmem1Q9D9Y8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.95■□□□□ 0.46
Ssmem1Q9D9Y8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.95■□□□□ 0.46
Ssmem1Q9D9Y8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssmem1Q9D9Y8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ssmem1Q9D9Y8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssmem1Q9D9Y8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ssmem1Q9D9Y8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssmem1Q9D9Y8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssmem1Q9D9Y8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ssmem1Q9D9Y8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ssmem1Q9D9Y8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssmem1Q9D9Y8 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.94■□□□□ 0.46
Ssmem1Q9D9Y8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssmem1Q9D9Y8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ssmem1Q9D9Y8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ssmem1Q9D9Y8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ssmem1Q9D9Y8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ssmem1Q9D9Y8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ssmem1Q9D9Y8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssmem1Q9D9Y8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ssmem1Q9D9Y8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.94■□□□□ 0.46
Ssmem1Q9D9Y8 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.94■□□□□ 0.46
Ssmem1Q9D9Y8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ssmem1Q9D9Y8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssmem1Q9D9Y8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssmem1Q9D9Y8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssmem1Q9D9Y8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssmem1Q9D9Y8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssmem1Q9D9Y8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ssmem1Q9D9Y8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ssmem1Q9D9Y8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
Ssmem1Q9D9Y8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.93■□□□□ 0.46
Ssmem1Q9D9Y8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ssmem1Q9D9Y8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.93■□□□□ 0.46
Ssmem1Q9D9Y8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.93■□□□□ 0.46
Ssmem1Q9D9Y8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.92■□□□□ 0.46
Ssmem1Q9D9Y8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ssmem1Q9D9Y8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssmem1Q9D9Y8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.91■□□□□ 0.46
Ssmem1Q9D9Y8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ssmem1Q9D9Y8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssmem1Q9D9Y8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ssmem1Q9D9Y8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssmem1Q9D9Y8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssmem1Q9D9Y8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ssmem1Q9D9Y8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssmem1Q9D9Y8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.9■□□□□ 0.46
Ssmem1Q9D9Y8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssmem1Q9D9Y8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssmem1Q9D9Y8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ssmem1Q9D9Y8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ssmem1Q9D9Y8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssmem1Q9D9Y8 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssmem1Q9D9Y8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssmem1Q9D9Y8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.89■□□□□ 0.45
Ssmem1Q9D9Y8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssmem1Q9D9Y8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
Ssmem1Q9D9Y8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssmem1Q9D9Y8 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssmem1Q9D9Y8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Ssmem1Q9D9Y8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ssmem1Q9D9Y8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Ssmem1Q9D9Y8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssmem1Q9D9Y8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ssmem1Q9D9Y8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ssmem1Q9D9Y8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ssmem1Q9D9Y8 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssmem1Q9D9Y8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssmem1Q9D9Y8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ssmem1Q9D9Y8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ssmem1Q9D9Y8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ssmem1Q9D9Y8 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.87■□□□□ 0.45
Ssmem1Q9D9Y8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms