Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Mbd3l1Q9D9H3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mbd3l1Q9D9H3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mbd3l1Q9D9H3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Mbd3l1Q9D9H3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Mbd3l1Q9D9H3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mbd3l1Q9D9H3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Mbd3l1Q9D9H3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Mbd3l1Q9D9H3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Mbd3l1Q9D9H3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mbd3l1Q9D9H3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18■□□□□ 0.47
Mbd3l1Q9D9H3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Mbd3l1Q9D9H3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Mbd3l1Q9D9H3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mbd3l1Q9D9H3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
Mbd3l1Q9D9H3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Mbd3l1Q9D9H3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mbd3l1Q9D9H3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mbd3l1Q9D9H3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mbd3l1Q9D9H3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mbd3l1Q9D9H3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.98■□□□□ 0.47
Mbd3l1Q9D9H3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Mbd3l1Q9D9H3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.98■□□□□ 0.47
Mbd3l1Q9D9H3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mbd3l1Q9D9H3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mbd3l1Q9D9H3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.98■□□□□ 0.47
Mbd3l1Q9D9H3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mbd3l1Q9D9H3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.98■□□□□ 0.47
Mbd3l1Q9D9H3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mbd3l1Q9D9H3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mbd3l1Q9D9H3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mbd3l1Q9D9H3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Mbd3l1Q9D9H3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mbd3l1Q9D9H3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mbd3l1Q9D9H3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mbd3l1Q9D9H3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mbd3l1Q9D9H3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mbd3l1Q9D9H3 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.96■□□□□ 0.47
Mbd3l1Q9D9H3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mbd3l1Q9D9H3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mbd3l1Q9D9H3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.96■□□□□ 0.47
Mbd3l1Q9D9H3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mbd3l1Q9D9H3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Mbd3l1Q9D9H3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mbd3l1Q9D9H3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Mbd3l1Q9D9H3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mbd3l1Q9D9H3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mbd3l1Q9D9H3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mbd3l1Q9D9H3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.95■□□□□ 0.46
Mbd3l1Q9D9H3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mbd3l1Q9D9H3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mbd3l1Q9D9H3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mbd3l1Q9D9H3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mbd3l1Q9D9H3 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.95■□□□□ 0.46
Mbd3l1Q9D9H3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mbd3l1Q9D9H3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
Mbd3l1Q9D9H3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Mbd3l1Q9D9H3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Mbd3l1Q9D9H3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mbd3l1Q9D9H3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mbd3l1Q9D9H3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mbd3l1Q9D9H3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Mbd3l1Q9D9H3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mbd3l1Q9D9H3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mbd3l1Q9D9H3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mbd3l1Q9D9H3 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mbd3l1Q9D9H3 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.93■□□□□ 0.46
Mbd3l1Q9D9H3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Mbd3l1Q9D9H3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Mbd3l1Q9D9H3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.93■□□□□ 0.46
Mbd3l1Q9D9H3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mbd3l1Q9D9H3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.93■□□□□ 0.46
Mbd3l1Q9D9H3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mbd3l1Q9D9H3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Mbd3l1Q9D9H3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.92■□□□□ 0.46
Mbd3l1Q9D9H3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mbd3l1Q9D9H3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mbd3l1Q9D9H3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mbd3l1Q9D9H3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mbd3l1Q9D9H3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mbd3l1Q9D9H3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Mbd3l1Q9D9H3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mbd3l1Q9D9H3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mbd3l1Q9D9H3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.92■□□□□ 0.46
Mbd3l1Q9D9H3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mbd3l1Q9D9H3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Mbd3l1Q9D9H3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mbd3l1Q9D9H3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mbd3l1Q9D9H3 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.91■□□□□ 0.46
Mbd3l1Q9D9H3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mbd3l1Q9D9H3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mbd3l1Q9D9H3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mbd3l1Q9D9H3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mbd3l1Q9D9H3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mbd3l1Q9D9H3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mbd3l1Q9D9H3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.9■□□□□ 0.46
Mbd3l1Q9D9H3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mbd3l1Q9D9H3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mbd3l1Q9D9H3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mbd3l1Q9D9H3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms