Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubqln4Q99NB8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubqln4Q99NB8 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubqln4Q99NB8 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ubqln4Q99NB8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Ubqln4Q99NB8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.89■□□□□ 0.62
Ubqln4Q99NB8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ubqln4Q99NB8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ubqln4Q99NB8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ubqln4Q99NB8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ubqln4Q99NB8 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ubqln4Q99NB8 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ubqln4Q99NB8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.89■□□□□ 0.61
Ubqln4Q99NB8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ubqln4Q99NB8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ubqln4Q99NB8 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ubqln4Q99NB8 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.89■□□□□ 0.61
Ubqln4Q99NB8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ubqln4Q99NB8 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubqln4Q99NB8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubqln4Q99NB8 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.88■□□□□ 0.61
Ubqln4Q99NB8 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.88■□□□□ 0.61
Ubqln4Q99NB8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Ubqln4Q99NB8 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ubqln4Q99NB8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubqln4Q99NB8 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.87■□□□□ 0.61
Ubqln4Q99NB8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ubqln4Q99NB8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubqln4Q99NB8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.87■□□□□ 0.61
Ubqln4Q99NB8 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubqln4Q99NB8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubqln4Q99NB8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Ubqln4Q99NB8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ubqln4Q99NB8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ubqln4Q99NB8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubqln4Q99NB8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ubqln4Q99NB8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubqln4Q99NB8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubqln4Q99NB8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubqln4Q99NB8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubqln4Q99NB8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ubqln4Q99NB8 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ubqln4Q99NB8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ubqln4Q99NB8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Ubqln4Q99NB8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubqln4Q99NB8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubqln4Q99NB8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ubqln4Q99NB8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ubqln4Q99NB8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubqln4Q99NB8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.85■□□□□ 0.61
Ubqln4Q99NB8 Gm10399-202ENSMUST00000202768 748 ntBASIC18.85■□□□□ 0.61
Ubqln4Q99NB8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubqln4Q99NB8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubqln4Q99NB8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubqln4Q99NB8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubqln4Q99NB8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ubqln4Q99NB8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubqln4Q99NB8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ubqln4Q99NB8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubqln4Q99NB8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ubqln4Q99NB8 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.84■□□□□ 0.61
Ubqln4Q99NB8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubqln4Q99NB8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubqln4Q99NB8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubqln4Q99NB8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubqln4Q99NB8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ubqln4Q99NB8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.83■□□□□ 0.61
Ubqln4Q99NB8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ubqln4Q99NB8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ubqln4Q99NB8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ubqln4Q99NB8 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ubqln4Q99NB8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ubqln4Q99NB8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ubqln4Q99NB8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ubqln4Q99NB8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ubqln4Q99NB8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubqln4Q99NB8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubqln4Q99NB8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubqln4Q99NB8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ubqln4Q99NB8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubqln4Q99NB8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ubqln4Q99NB8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ubqln4Q99NB8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Ubqln4Q99NB8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubqln4Q99NB8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ubqln4Q99NB8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubqln4Q99NB8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubqln4Q99NB8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.81■□□□□ 0.6
Ubqln4Q99NB8 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.81■□□□□ 0.6
Ubqln4Q99NB8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.81■□□□□ 0.6
Ubqln4Q99NB8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.81■□□□□ 0.6
Ubqln4Q99NB8 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.81■□□□□ 0.6
Ubqln4Q99NB8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubqln4Q99NB8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubqln4Q99NB8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ubqln4Q99NB8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.8■□□□□ 0.6
Ubqln4Q99NB8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubqln4Q99NB8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubqln4Q99NB8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ubqln4Q99NB8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms