Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Homer3Q99JP6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Homer3Q99JP6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.66■□□□□ 0.9
Homer3Q99JP6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Homer3Q99JP6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Homer3Q99JP6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Homer3Q99JP6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Homer3Q99JP6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Homer3Q99JP6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Homer3Q99JP6 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.65■□□□□ 0.9
Homer3Q99JP6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Homer3Q99JP6 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Homer3Q99JP6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Homer3Q99JP6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.65■□□□□ 0.9
Homer3Q99JP6 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Homer3Q99JP6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Homer3Q99JP6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Homer3Q99JP6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Homer3Q99JP6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Homer3Q99JP6 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Homer3Q99JP6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Homer3Q99JP6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Homer3Q99JP6 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Homer3Q99JP6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Homer3Q99JP6 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Homer3Q99JP6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Homer3Q99JP6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.63■□□□□ 0.89
Homer3Q99JP6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Homer3Q99JP6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Homer3Q99JP6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.63■□□□□ 0.89
Homer3Q99JP6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Homer3Q99JP6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Homer3Q99JP6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Homer3Q99JP6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Homer3Q99JP6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Homer3Q99JP6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Homer3Q99JP6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Homer3Q99JP6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Homer3Q99JP6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Homer3Q99JP6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Homer3Q99JP6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Homer3Q99JP6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Homer3Q99JP6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Homer3Q99JP6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Homer3Q99JP6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.61■□□□□ 0.89
Homer3Q99JP6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Homer3Q99JP6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Homer3Q99JP6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Homer3Q99JP6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Homer3Q99JP6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Homer3Q99JP6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Homer3Q99JP6 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Homer3Q99JP6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Homer3Q99JP6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Homer3Q99JP6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Homer3Q99JP6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Homer3Q99JP6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Homer3Q99JP6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.59■□□□□ 0.89
Homer3Q99JP6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Homer3Q99JP6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Homer3Q99JP6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Homer3Q99JP6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Homer3Q99JP6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Homer3Q99JP6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Homer3Q99JP6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Homer3Q99JP6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Homer3Q99JP6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Homer3Q99JP6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Homer3Q99JP6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Homer3Q99JP6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Homer3Q99JP6 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.58■□□□□ 0.88
Homer3Q99JP6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Homer3Q99JP6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Homer3Q99JP6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Homer3Q99JP6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
Homer3Q99JP6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Homer3Q99JP6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Homer3Q99JP6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.57■□□□□ 0.88
Homer3Q99JP6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Homer3Q99JP6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Homer3Q99JP6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Homer3Q99JP6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Homer3Q99JP6 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Homer3Q99JP6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Homer3Q99JP6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Homer3Q99JP6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Homer3Q99JP6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Homer3Q99JP6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Homer3Q99JP6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Homer3Q99JP6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Homer3Q99JP6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.56■□□□□ 0.88
Homer3Q99JP6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Homer3Q99JP6 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Homer3Q99JP6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Homer3Q99JP6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Homer3Q99JP6 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Homer3Q99JP6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Homer3Q99JP6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Homer3Q99JP6 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.55■□□□□ 0.88
Homer3Q99JP6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms