Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb4Q91XZ6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb4Q91XZ6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhb4Q91XZ6 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdhb4Q91XZ6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb4Q91XZ6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Pcdhb4Q91XZ6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb4Q91XZ6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb4Q91XZ6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhb4Q91XZ6 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb4Q91XZ6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdhb4Q91XZ6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb4Q91XZ6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb4Q91XZ6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb4Q91XZ6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhb4Q91XZ6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb4Q91XZ6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.54■□□□□ 0.88
Pcdhb4Q91XZ6 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.54■□□□□ 0.88
Pcdhb4Q91XZ6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.54■□□□□ 0.88
Pcdhb4Q91XZ6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb4Q91XZ6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb4Q91XZ6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb4Q91XZ6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb4Q91XZ6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb4Q91XZ6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb4Q91XZ6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb4Q91XZ6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhb4Q91XZ6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.53■□□□□ 0.88
Pcdhb4Q91XZ6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb4Q91XZ6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb4Q91XZ6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb4Q91XZ6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb4Q91XZ6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb4Q91XZ6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb4Q91XZ6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhb4Q91XZ6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb4Q91XZ6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Pcdhb4Q91XZ6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb4Q91XZ6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb4Q91XZ6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb4Q91XZ6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Pcdhb4Q91XZ6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb4Q91XZ6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb4Q91XZ6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.52■□□□□ 0.87
Pcdhb4Q91XZ6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb4Q91XZ6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhb4Q91XZ6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhb4Q91XZ6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb4Q91XZ6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb4Q91XZ6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhb4Q91XZ6 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb4Q91XZ6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb4Q91XZ6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb4Q91XZ6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb4Q91XZ6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb4Q91XZ6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.5■□□□□ 0.87
Pcdhb4Q91XZ6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdhb4Q91XZ6 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb4Q91XZ6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.5■□□□□ 0.87
Pcdhb4Q91XZ6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb4Q91XZ6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb4Q91XZ6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb4Q91XZ6 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb4Q91XZ6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb4Q91XZ6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pcdhb4Q91XZ6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb4Q91XZ6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb4Q91XZ6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb4Q91XZ6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb4Q91XZ6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb4Q91XZ6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb4Q91XZ6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb4Q91XZ6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.49■□□□□ 0.87
Pcdhb4Q91XZ6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb4Q91XZ6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdhb4Q91XZ6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb4Q91XZ6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb4Q91XZ6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb4Q91XZ6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhb4Q91XZ6 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.48■□□□□ 0.87
Pcdhb4Q91XZ6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb4Q91XZ6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb4Q91XZ6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb4Q91XZ6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb4Q91XZ6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb4Q91XZ6 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.48■□□□□ 0.87
Pcdhb4Q91XZ6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhb4Q91XZ6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb4Q91XZ6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Pcdhb4Q91XZ6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb4Q91XZ6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb4Q91XZ6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb4Q91XZ6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
Pcdhb4Q91XZ6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb4Q91XZ6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.46■□□□□ 0.87
Pcdhb4Q91XZ6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb4Q91XZ6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb4Q91XZ6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Pcdhb4Q91XZ6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhb4Q91XZ6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms