Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb1Q91XX8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Pcdhgb1Q91XX8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb1Q91XX8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
Pcdhgb1Q91XX8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.62■■□□□ 1.05
Pcdhgb1Q91XX8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb1Q91XX8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb1Q91XX8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb1Q91XX8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb1Q91XX8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhgb1Q91XX8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgb1Q91XX8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgb1Q91XX8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgb1Q91XX8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.61■■□□□ 1.05
Pcdhgb1Q91XX8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.61■■□□□ 1.05
Pcdhgb1Q91XX8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.61■■□□□ 1.05
Pcdhgb1Q91XX8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgb1Q91XX8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgb1Q91XX8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhgb1Q91XX8 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Pcdhgb1Q91XX8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhgb1Q91XX8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.6■■□□□ 1.05
Pcdhgb1Q91XX8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhgb1Q91XX8 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.6■■□□□ 1.05
Pcdhgb1Q91XX8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhgb1Q91XX8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Pcdhgb1Q91XX8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb1Q91XX8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb1Q91XX8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb1Q91XX8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb1Q91XX8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
Pcdhgb1Q91XX8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb1Q91XX8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhgb1Q91XX8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgb1Q91XX8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgb1Q91XX8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Pcdhgb1Q91XX8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.58■■□□□ 1.05
Pcdhgb1Q91XX8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgb1Q91XX8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhgb1Q91XX8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb1Q91XX8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
Pcdhgb1Q91XX8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb1Q91XX8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb1Q91XX8 Gm12922-201ENSMUST00000120626 809 ntBASIC21.57■■□□□ 1.04
Pcdhgb1Q91XX8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Pcdhgb1Q91XX8 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcdhgb1Q91XX8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhgb1Q91XX8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb1Q91XX8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb1Q91XX8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhgb1Q91XX8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb1Q91XX8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb1Q91XX8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb1Q91XX8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.56■■□□□ 1.04
Pcdhgb1Q91XX8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Pcdhgb1Q91XX8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
Pcdhgb1Q91XX8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.56■■□□□ 1.04
Pcdhgb1Q91XX8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhgb1Q91XX8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.55■■□□□ 1.04
Pcdhgb1Q91XX8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Pcdhgb1Q91XX8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
Pcdhgb1Q91XX8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.55■■□□□ 1.04
Pcdhgb1Q91XX8 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgb1Q91XX8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgb1Q91XX8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgb1Q91XX8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Pcdhgb1Q91XX8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Pcdhgb1Q91XX8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgb1Q91XX8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhgb1Q91XX8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb1Q91XX8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdhgb1Q91XX8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.53■■□□□ 1.04
Pcdhgb1Q91XX8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.53■■□□□ 1.04
Pcdhgb1Q91XX8 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.53■■□□□ 1.04
Pcdhgb1Q91XX8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb1Q91XX8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb1Q91XX8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Pcdhgb1Q91XX8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdhgb1Q91XX8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhgb1Q91XX8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Pcdhgb1Q91XX8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcdhgb1Q91XX8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhgb1Q91XX8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhgb1Q91XX8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.52■■□□□ 1.04
Pcdhgb1Q91XX8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.52■■□□□ 1.04
Pcdhgb1Q91XX8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Pcdhgb1Q91XX8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdhgb1Q91XX8 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgb1Q91XX8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgb1Q91XX8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgb1Q91XX8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgb1Q91XX8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgb1Q91XX8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgb1Q91XX8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Pcdhgb1Q91XX8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgb1Q91XX8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgb1Q91XX8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.5■■□□□ 1.03
Pcdhgb1Q91XX8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.5■■□□□ 1.03
Pcdhgb1Q91XX8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Pcdhgb1Q91XX8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms