Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.48■□□□□ 0.87
Lrif1Q8CDD9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Lrif1Q8CDD9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrif1Q8CDD9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrif1Q8CDD9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.48■□□□□ 0.87
Lrif1Q8CDD9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrif1Q8CDD9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrif1Q8CDD9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrif1Q8CDD9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Lrif1Q8CDD9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrif1Q8CDD9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrif1Q8CDD9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Lrif1Q8CDD9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Lrif1Q8CDD9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Lrif1Q8CDD9 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrif1Q8CDD9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrif1Q8CDD9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Lrif1Q8CDD9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Lrif1Q8CDD9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrif1Q8CDD9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrif1Q8CDD9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrif1Q8CDD9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrif1Q8CDD9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lrif1Q8CDD9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Lrif1Q8CDD9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Lrif1Q8CDD9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Lrif1Q8CDD9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrif1Q8CDD9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Lrif1Q8CDD9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrif1Q8CDD9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Lrif1Q8CDD9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrif1Q8CDD9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Lrif1Q8CDD9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.44■□□□□ 0.86
Lrif1Q8CDD9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lrif1Q8CDD9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lrif1Q8CDD9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Lrif1Q8CDD9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Lrif1Q8CDD9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Lrif1Q8CDD9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Lrif1Q8CDD9 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Lrif1Q8CDD9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lrif1Q8CDD9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Lrif1Q8CDD9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Lrif1Q8CDD9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Lrif1Q8CDD9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.42■□□□□ 0.86
Lrif1Q8CDD9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lrif1Q8CDD9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.42■□□□□ 0.86
Lrif1Q8CDD9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lrif1Q8CDD9 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Lrif1Q8CDD9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Lrif1Q8CDD9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lrif1Q8CDD9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lrif1Q8CDD9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Lrif1Q8CDD9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lrif1Q8CDD9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lrif1Q8CDD9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lrif1Q8CDD9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Lrif1Q8CDD9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lrif1Q8CDD9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lrif1Q8CDD9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lrif1Q8CDD9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lrif1Q8CDD9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lrif1Q8CDD9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lrif1Q8CDD9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.4■□□□□ 0.86
Lrif1Q8CDD9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lrif1Q8CDD9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lrif1Q8CDD9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lrif1Q8CDD9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lrif1Q8CDD9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Lrif1Q8CDD9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lrif1Q8CDD9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lrif1Q8CDD9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lrif1Q8CDD9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Lrif1Q8CDD9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lrif1Q8CDD9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lrif1Q8CDD9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lrif1Q8CDD9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lrif1Q8CDD9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Lrif1Q8CDD9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lrif1Q8CDD9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrif1Q8CDD9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrif1Q8CDD9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Lrif1Q8CDD9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.38■□□□□ 0.85
Lrif1Q8CDD9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrif1Q8CDD9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lrif1Q8CDD9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lrif1Q8CDD9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Lrif1Q8CDD9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Lrif1Q8CDD9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lrif1Q8CDD9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrif1Q8CDD9 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.37■□□□□ 0.85
Lrif1Q8CDD9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrif1Q8CDD9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrif1Q8CDD9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrif1Q8CDD9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrif1Q8CDD9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrif1Q8CDD9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Lrif1Q8CDD9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrif1Q8CDD9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Lrif1Q8CDD9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 132.8 ms