Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Smim4Q8C1Q6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smim4Q8C1Q6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smim4Q8C1Q6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smim4Q8C1Q6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Smim4Q8C1Q6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Smim4Q8C1Q6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.36■□□□□ 0.37
Smim4Q8C1Q6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Smim4Q8C1Q6 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.36■□□□□ 0.37
Smim4Q8C1Q6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.35■□□□□ 0.37
Smim4Q8C1Q6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim4Q8C1Q6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smim4Q8C1Q6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim4Q8C1Q6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smim4Q8C1Q6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.35■□□□□ 0.37
Smim4Q8C1Q6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Smim4Q8C1Q6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smim4Q8C1Q6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Smim4Q8C1Q6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Smim4Q8C1Q6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Smim4Q8C1Q6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim4Q8C1Q6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim4Q8C1Q6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim4Q8C1Q6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim4Q8C1Q6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Smim4Q8C1Q6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim4Q8C1Q6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smim4Q8C1Q6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smim4Q8C1Q6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smim4Q8C1Q6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.33■□□□□ 0.37
Smim4Q8C1Q6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Smim4Q8C1Q6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smim4Q8C1Q6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Smim4Q8C1Q6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim4Q8C1Q6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smim4Q8C1Q6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.33■□□□□ 0.36
Smim4Q8C1Q6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim4Q8C1Q6 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim4Q8C1Q6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim4Q8C1Q6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim4Q8C1Q6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim4Q8C1Q6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smim4Q8C1Q6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim4Q8C1Q6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Smim4Q8C1Q6 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.32■□□□□ 0.36
Smim4Q8C1Q6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.32■□□□□ 0.36
Smim4Q8C1Q6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.32■□□□□ 0.36
Smim4Q8C1Q6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim4Q8C1Q6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim4Q8C1Q6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Smim4Q8C1Q6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smim4Q8C1Q6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.31■□□□□ 0.36
Smim4Q8C1Q6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim4Q8C1Q6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim4Q8C1Q6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim4Q8C1Q6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.31■□□□□ 0.36
Smim4Q8C1Q6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smim4Q8C1Q6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.31■□□□□ 0.36
Smim4Q8C1Q6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim4Q8C1Q6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim4Q8C1Q6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smim4Q8C1Q6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim4Q8C1Q6 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Smim4Q8C1Q6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim4Q8C1Q6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.3■□□□□ 0.36
Smim4Q8C1Q6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim4Q8C1Q6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim4Q8C1Q6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Smim4Q8C1Q6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smim4Q8C1Q6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim4Q8C1Q6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smim4Q8C1Q6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim4Q8C1Q6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim4Q8C1Q6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim4Q8C1Q6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim4Q8C1Q6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smim4Q8C1Q6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim4Q8C1Q6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smim4Q8C1Q6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim4Q8C1Q6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim4Q8C1Q6 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smim4Q8C1Q6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smim4Q8C1Q6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smim4Q8C1Q6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim4Q8C1Q6 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.28■□□□□ 0.36
Smim4Q8C1Q6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.28■□□□□ 0.36
Smim4Q8C1Q6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim4Q8C1Q6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Smim4Q8C1Q6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smim4Q8C1Q6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Smim4Q8C1Q6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim4Q8C1Q6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smim4Q8C1Q6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smim4Q8C1Q6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smim4Q8C1Q6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smim4Q8C1Q6 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.27■□□□□ 0.36
Smim4Q8C1Q6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.27■□□□□ 0.36
Smim4Q8C1Q6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smim4Q8C1Q6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Smim4Q8C1Q6 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms