Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.16■□□□□ 0.98
Sh3rf2Q8BZT2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3rf2Q8BZT2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3rf2Q8BZT2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Sh3rf2Q8BZT2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3rf2Q8BZT2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Sh3rf2Q8BZT2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.15■□□□□ 0.98
Sh3rf2Q8BZT2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sh3rf2Q8BZT2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Sh3rf2Q8BZT2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sh3rf2Q8BZT2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sh3rf2Q8BZT2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3rf2Q8BZT2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.14■□□□□ 0.97
Sh3rf2Q8BZT2 Gm45417-201ENSMUST00000209533 758 ntBASIC21.14■□□□□ 0.97
Sh3rf2Q8BZT2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sh3rf2Q8BZT2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Sh3rf2Q8BZT2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3rf2Q8BZT2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3rf2Q8BZT2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3rf2Q8BZT2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Sh3rf2Q8BZT2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3rf2Q8BZT2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3rf2Q8BZT2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.13■□□□□ 0.97
Sh3rf2Q8BZT2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.13■□□□□ 0.97
Sh3rf2Q8BZT2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sh3rf2Q8BZT2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Sh3rf2Q8BZT2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
Sh3rf2Q8BZT2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sh3rf2Q8BZT2 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.12■□□□□ 0.97
Sh3rf2Q8BZT2 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf2Q8BZT2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf2Q8BZT2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf2Q8BZT2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf2Q8BZT2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf2Q8BZT2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf2Q8BZT2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sh3rf2Q8BZT2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf2Q8BZT2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf2Q8BZT2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Sh3rf2Q8BZT2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf2Q8BZT2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf2Q8BZT2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.11■□□□□ 0.97
Sh3rf2Q8BZT2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf2Q8BZT2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Sh3rf2Q8BZT2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf2Q8BZT2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sh3rf2Q8BZT2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3rf2Q8BZT2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.1■□□□□ 0.97
Sh3rf2Q8BZT2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3rf2Q8BZT2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Sh3rf2Q8BZT2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3rf2Q8BZT2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Sh3rf2Q8BZT2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Sh3rf2Q8BZT2 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3rf2Q8BZT2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3rf2Q8BZT2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.1■□□□□ 0.97
Sh3rf2Q8BZT2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sh3rf2Q8BZT2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3rf2Q8BZT2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3rf2Q8BZT2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3rf2Q8BZT2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3rf2Q8BZT2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3rf2Q8BZT2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Sh3rf2Q8BZT2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3rf2Q8BZT2 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.09■□□□□ 0.97
Sh3rf2Q8BZT2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sh3rf2Q8BZT2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3rf2Q8BZT2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sh3rf2Q8BZT2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Sh3rf2Q8BZT2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3rf2Q8BZT2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3rf2Q8BZT2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sh3rf2Q8BZT2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3rf2Q8BZT2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.07■□□□□ 0.96
Sh3rf2Q8BZT2 Gm7143-201ENSMUST00000222811 859 ntBASIC21.07■□□□□ 0.96
Sh3rf2Q8BZT2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3rf2Q8BZT2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3rf2Q8BZT2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sh3rf2Q8BZT2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.07■□□□□ 0.96
Sh3rf2Q8BZT2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3rf2Q8BZT2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sh3rf2Q8BZT2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.06■□□□□ 0.96
Sh3rf2Q8BZT2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3rf2Q8BZT2 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.05■□□□□ 0.96
Sh3rf2Q8BZT2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3rf2Q8BZT2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3rf2Q8BZT2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Sh3rf2Q8BZT2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3rf2Q8BZT2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sh3rf2Q8BZT2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sh3rf2Q8BZT2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms