Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Zc3hc1Q80YV2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Zc3hc1Q80YV2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Zc3hc1Q80YV2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Zc3hc1Q80YV2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.96■□□□□ 0.63
Zc3hc1Q80YV2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Zc3hc1Q80YV2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Zc3hc1Q80YV2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zc3hc1Q80YV2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zc3hc1Q80YV2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zc3hc1Q80YV2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zc3hc1Q80YV2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zc3hc1Q80YV2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Zc3hc1Q80YV2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zc3hc1Q80YV2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zc3hc1Q80YV2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Zc3hc1Q80YV2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zc3hc1Q80YV2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zc3hc1Q80YV2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
Zc3hc1Q80YV2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zc3hc1Q80YV2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zc3hc1Q80YV2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.94■□□□□ 0.62
Zc3hc1Q80YV2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zc3hc1Q80YV2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Zc3hc1Q80YV2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Zc3hc1Q80YV2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Zc3hc1Q80YV2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zc3hc1Q80YV2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Zc3hc1Q80YV2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Zc3hc1Q80YV2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Zc3hc1Q80YV2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Zc3hc1Q80YV2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Zc3hc1Q80YV2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Zc3hc1Q80YV2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Zc3hc1Q80YV2 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Zc3hc1Q80YV2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Zc3hc1Q80YV2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Zc3hc1Q80YV2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Zc3hc1Q80YV2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Zc3hc1Q80YV2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zc3hc1Q80YV2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Zc3hc1Q80YV2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zc3hc1Q80YV2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zc3hc1Q80YV2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zc3hc1Q80YV2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zc3hc1Q80YV2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zc3hc1Q80YV2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zc3hc1Q80YV2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zc3hc1Q80YV2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zc3hc1Q80YV2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Zc3hc1Q80YV2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zc3hc1Q80YV2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.91■□□□□ 0.62
Zc3hc1Q80YV2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zc3hc1Q80YV2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zc3hc1Q80YV2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zc3hc1Q80YV2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zc3hc1Q80YV2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zc3hc1Q80YV2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zc3hc1Q80YV2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Zc3hc1Q80YV2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zc3hc1Q80YV2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Zc3hc1Q80YV2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Zc3hc1Q80YV2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Zc3hc1Q80YV2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Zc3hc1Q80YV2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Zc3hc1Q80YV2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.9■□□□□ 0.62
Zc3hc1Q80YV2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.9■□□□□ 0.62
Zc3hc1Q80YV2 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.9■□□□□ 0.62
Zc3hc1Q80YV2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Zc3hc1Q80YV2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Zc3hc1Q80YV2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Zc3hc1Q80YV2 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.9■□□□□ 0.62
Zc3hc1Q80YV2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Zc3hc1Q80YV2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3hc1Q80YV2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3hc1Q80YV2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3hc1Q80YV2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3hc1Q80YV2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Zc3hc1Q80YV2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3hc1Q80YV2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3hc1Q80YV2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3hc1Q80YV2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3hc1Q80YV2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3hc1Q80YV2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3hc1Q80YV2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3hc1Q80YV2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Zc3hc1Q80YV2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zc3hc1Q80YV2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zc3hc1Q80YV2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zc3hc1Q80YV2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zc3hc1Q80YV2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zc3hc1Q80YV2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Zc3hc1Q80YV2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zc3hc1Q80YV2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Zc3hc1Q80YV2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zc3hc1Q80YV2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Zc3hc1Q80YV2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.87■□□□□ 0.61
Zc3hc1Q80YV2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zc3hc1Q80YV2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Zc3hc1Q80YV2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms