Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Pif1Q80SX8 Gm9870-201ENSMUST00000063874 645 ntBASIC19.14■□□□□ 0.65
Pif1Q80SX8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pif1Q80SX8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pif1Q80SX8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pif1Q80SX8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pif1Q80SX8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Pif1Q80SX8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pif1Q80SX8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pif1Q80SX8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pif1Q80SX8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.13■□□□□ 0.65
Pif1Q80SX8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pif1Q80SX8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pif1Q80SX8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pif1Q80SX8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pif1Q80SX8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pif1Q80SX8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pif1Q80SX8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Pif1Q80SX8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pif1Q80SX8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pif1Q80SX8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pif1Q80SX8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pif1Q80SX8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pif1Q80SX8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pif1Q80SX8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.12■□□□□ 0.65
Pif1Q80SX8 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pif1Q80SX8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pif1Q80SX8 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pif1Q80SX8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pif1Q80SX8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.11■□□□□ 0.65
Pif1Q80SX8 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.11■□□□□ 0.65
Pif1Q80SX8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.11■□□□□ 0.65
Pif1Q80SX8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pif1Q80SX8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pif1Q80SX8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pif1Q80SX8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pif1Q80SX8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pif1Q80SX8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pif1Q80SX8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pif1Q80SX8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.1■□□□□ 0.65
Pif1Q80SX8 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.1■□□□□ 0.65
Pif1Q80SX8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pif1Q80SX8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pif1Q80SX8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pif1Q80SX8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Pif1Q80SX8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pif1Q80SX8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pif1Q80SX8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pif1Q80SX8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pif1Q80SX8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pif1Q80SX8 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pif1Q80SX8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pif1Q80SX8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pif1Q80SX8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pif1Q80SX8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pif1Q80SX8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pif1Q80SX8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pif1Q80SX8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Pif1Q80SX8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Pif1Q80SX8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pif1Q80SX8 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.08■□□□□ 0.64
Pif1Q80SX8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pif1Q80SX8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pif1Q80SX8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pif1Q80SX8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.07■□□□□ 0.64
Pif1Q80SX8 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
Pif1Q80SX8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pif1Q80SX8 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pif1Q80SX8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Pif1Q80SX8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pif1Q80SX8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.06■□□□□ 0.64
Pif1Q80SX8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Pif1Q80SX8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.06■□□□□ 0.64
Pif1Q80SX8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pif1Q80SX8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pif1Q80SX8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pif1Q80SX8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pif1Q80SX8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Pif1Q80SX8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pif1Q80SX8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pif1Q80SX8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pif1Q80SX8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pif1Q80SX8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pif1Q80SX8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.05■□□□□ 0.64
Pif1Q80SX8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pif1Q80SX8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.05■□□□□ 0.64
Pif1Q80SX8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pif1Q80SX8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pif1Q80SX8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Pif1Q80SX8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pif1Q80SX8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.04■□□□□ 0.64
Pif1Q80SX8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pif1Q80SX8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pif1Q80SX8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Pif1Q80SX8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pif1Q80SX8 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pif1Q80SX8 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.03■□□□□ 0.64
Pif1Q80SX8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pif1Q80SX8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pif1Q80SX8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms