Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Bdp1Q571C7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Bdp1Q571C7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Bdp1Q571C7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Bdp1Q571C7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Bdp1Q571C7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Bdp1Q571C7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.64■■□□□ 1.05
Bdp1Q571C7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Bdp1Q571C7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Bdp1Q571C7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Bdp1Q571C7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.64■■□□□ 1.05
Bdp1Q571C7 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.64■■□□□ 1.05
Bdp1Q571C7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Bdp1Q571C7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.64■■□□□ 1.05
Bdp1Q571C7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Bdp1Q571C7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.63■■□□□ 1.05
Bdp1Q571C7 Smad6-203ENSMUST00000179458 273 ntBASIC21.63■■□□□ 1.05
Bdp1Q571C7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.63■■□□□ 1.05
Bdp1Q571C7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Bdp1Q571C7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Bdp1Q571C7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Bdp1Q571C7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
Bdp1Q571C7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Bdp1Q571C7 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.62■■□□□ 1.05
Bdp1Q571C7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Bdp1Q571C7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
Bdp1Q571C7 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Bdp1Q571C7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Bdp1Q571C7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.61■■□□□ 1.05
Bdp1Q571C7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Bdp1Q571C7 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Bdp1Q571C7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Bdp1Q571C7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Bdp1Q571C7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Bdp1Q571C7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Bdp1Q571C7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Bdp1Q571C7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Bdp1Q571C7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Bdp1Q571C7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.6■■□□□ 1.05
Bdp1Q571C7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Bdp1Q571C7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Bdp1Q571C7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Bdp1Q571C7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Bdp1Q571C7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Bdp1Q571C7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Bdp1Q571C7 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.59■■□□□ 1.05
Bdp1Q571C7 Gm42778-201ENSMUST00000199644 553 ntBASIC21.59■■□□□ 1.05
Bdp1Q571C7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.59■■□□□ 1.05
Bdp1Q571C7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.59■■□□□ 1.05
Bdp1Q571C7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Bdp1Q571C7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.59■■□□□ 1.05
Bdp1Q571C7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Bdp1Q571C7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Bdp1Q571C7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.58■■□□□ 1.05
Bdp1Q571C7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Bdp1Q571C7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Bdp1Q571C7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.58■■□□□ 1.05
Bdp1Q571C7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Bdp1Q571C7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Bdp1Q571C7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Bdp1Q571C7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.57■■□□□ 1.04
Bdp1Q571C7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
Bdp1Q571C7 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.57■■□□□ 1.04
Bdp1Q571C7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Bdp1Q571C7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Bdp1Q571C7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Bdp1Q571C7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.56■■□□□ 1.04
Bdp1Q571C7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.56■■□□□ 1.04
Bdp1Q571C7 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Bdp1Q571C7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Bdp1Q571C7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Bdp1Q571C7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.56■■□□□ 1.04
Bdp1Q571C7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.56■■□□□ 1.04
Bdp1Q571C7 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Bdp1Q571C7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Bdp1Q571C7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Bdp1Q571C7 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Bdp1Q571C7 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Bdp1Q571C7 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.55■■□□□ 1.04
Bdp1Q571C7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Bdp1Q571C7 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Bdp1Q571C7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Bdp1Q571C7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
Bdp1Q571C7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.55■■□□□ 1.04
Bdp1Q571C7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.55■■□□□ 1.04
Bdp1Q571C7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.55■■□□□ 1.04
Bdp1Q571C7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.55■■□□□ 1.04
Bdp1Q571C7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.55■■□□□ 1.04
Bdp1Q571C7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Bdp1Q571C7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Bdp1Q571C7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Bdp1Q571C7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Bdp1Q571C7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Bdp1Q571C7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Bdp1Q571C7 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Bdp1Q571C7 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Bdp1Q571C7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Bdp1Q571C7 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Bdp1Q571C7 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Bdp1Q571C7 Gm12527-201ENSMUST00000117967 564 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms