Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp25Q3U435 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp25Q3U435 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp25Q3U435 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Mmp25Q3U435 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp25Q3U435 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp25Q3U435 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp25Q3U435 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp25Q3U435 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.59■□□□□ 0.73
Mmp25Q3U435 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Mmp25Q3U435 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.59■□□□□ 0.73
Mmp25Q3U435 Gm22238-201ENSMUST00000175222 88 ntBASIC19.59■□□□□ 0.73
Mmp25Q3U435 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Mmp25Q3U435 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Mmp25Q3U435 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.58■□□□□ 0.72
Mmp25Q3U435 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Mmp25Q3U435 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.57■□□□□ 0.72
Mmp25Q3U435 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.57■□□□□ 0.72
Mmp25Q3U435 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp25Q3U435 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp25Q3U435 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Mmp25Q3U435 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.57■□□□□ 0.72
Mmp25Q3U435 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Mmp25Q3U435 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp25Q3U435 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Mmp25Q3U435 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp25Q3U435 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp25Q3U435 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Mmp25Q3U435 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.56■□□□□ 0.72
Mmp25Q3U435 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.56■□□□□ 0.72
Mmp25Q3U435 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Mmp25Q3U435 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Mmp25Q3U435 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.56■□□□□ 0.72
Mmp25Q3U435 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp25Q3U435 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp25Q3U435 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp25Q3U435 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp25Q3U435 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.55■□□□□ 0.72
Mmp25Q3U435 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.55■□□□□ 0.72
Mmp25Q3U435 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp25Q3U435 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.55■□□□□ 0.72
Mmp25Q3U435 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp25Q3U435 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Mmp25Q3U435 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Mmp25Q3U435 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp25Q3U435 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
Mmp25Q3U435 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp25Q3U435 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp25Q3U435 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp25Q3U435 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Mmp25Q3U435 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp25Q3U435 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp25Q3U435 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp25Q3U435 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.53■□□□□ 0.72
Mmp25Q3U435 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp25Q3U435 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Mmp25Q3U435 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp25Q3U435 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp25Q3U435 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp25Q3U435 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp25Q3U435 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Mmp25Q3U435 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.52■□□□□ 0.72
Mmp25Q3U435 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.52■□□□□ 0.72
Mmp25Q3U435 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.52■□□□□ 0.72
Mmp25Q3U435 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.52■□□□□ 0.72
Mmp25Q3U435 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Mmp25Q3U435 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Mmp25Q3U435 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.51■□□□□ 0.71
Mmp25Q3U435 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
Mmp25Q3U435 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp25Q3U435 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp25Q3U435 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp25Q3U435 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp25Q3U435 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Mmp25Q3U435 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Mmp25Q3U435 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp25Q3U435 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp25Q3U435 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp25Q3U435 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp25Q3U435 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp25Q3U435 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.5■□□□□ 0.71
Mmp25Q3U435 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp25Q3U435 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.5■□□□□ 0.71
Mmp25Q3U435 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Mmp25Q3U435 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Mmp25Q3U435 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp25Q3U435 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp25Q3U435 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.49■□□□□ 0.71
Mmp25Q3U435 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Mmp25Q3U435 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
Mmp25Q3U435 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp25Q3U435 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.48■□□□□ 0.71
Mmp25Q3U435 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Mmp25Q3U435 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp25Q3U435 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.48■□□□□ 0.71
Mmp25Q3U435 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Mmp25Q3U435 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.48■□□□□ 0.71
Mmp25Q3U435 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Mmp25Q3U435 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Mmp25Q3U435 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms