Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.83■□□□□ 0.92
Pfdn6Q03958 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pfdn6Q03958 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pfdn6Q03958 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pfdn6Q03958 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Pfdn6Q03958 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pfdn6Q03958 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pfdn6Q03958 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pfdn6Q03958 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Pfdn6Q03958 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pfdn6Q03958 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.82■□□□□ 0.92
Pfdn6Q03958 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pfdn6Q03958 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pfdn6Q03958 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.81■□□□□ 0.92
Pfdn6Q03958 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pfdn6Q03958 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pfdn6Q03958 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pfdn6Q03958 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pfdn6Q03958 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pfdn6Q03958 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.8■□□□□ 0.92
Pfdn6Q03958 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pfdn6Q03958 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pfdn6Q03958 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.79■□□□□ 0.92
Pfdn6Q03958 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.79■□□□□ 0.92
Pfdn6Q03958 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.79■□□□□ 0.92
Pfdn6Q03958 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Pfdn6Q03958 Gm43566-201ENSMUST00000196851 808 ntBASIC20.79■□□□□ 0.92
Pfdn6Q03958 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Pfdn6Q03958 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pfdn6Q03958 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pfdn6Q03958 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pfdn6Q03958 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pfdn6Q03958 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Pfdn6Q03958 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pfdn6Q03958 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.78■□□□□ 0.92
Pfdn6Q03958 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pfdn6Q03958 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.78■□□□□ 0.92
Pfdn6Q03958 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pfdn6Q03958 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pfdn6Q03958 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pfdn6Q03958 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pfdn6Q03958 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pfdn6Q03958 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Pfdn6Q03958 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pfdn6Q03958 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pfdn6Q03958 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.77■□□□□ 0.92
Pfdn6Q03958 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.77■□□□□ 0.92
Pfdn6Q03958 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pfdn6Q03958 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Pfdn6Q03958 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn6Q03958 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Pfdn6Q03958 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.76■□□□□ 0.91
Pfdn6Q03958 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn6Q03958 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn6Q03958 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn6Q03958 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn6Q03958 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Pfdn6Q03958 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pfdn6Q03958 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pfdn6Q03958 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pfdn6Q03958 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pfdn6Q03958 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pfdn6Q03958 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pfdn6Q03958 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Pfdn6Q03958 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.75■□□□□ 0.91
Pfdn6Q03958 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pfdn6Q03958 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pfdn6Q03958 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pfdn6Q03958 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.75■□□□□ 0.91
Pfdn6Q03958 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn6Q03958 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn6Q03958 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn6Q03958 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pfdn6Q03958 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn6Q03958 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn6Q03958 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn6Q03958 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pfdn6Q03958 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pfdn6Q03958 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pfdn6Q03958 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pfdn6Q03958 Notumos-201ENSMUST00000151998 2659 ntBASIC20.72■□□□□ 0.91
Pfdn6Q03958 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.72■□□□□ 0.91
Pfdn6Q03958 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pfdn6Q03958 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Pfdn6Q03958 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.71■□□□□ 0.91
Pfdn6Q03958 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Pfdn6Q03958 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.71■□□□□ 0.91
Pfdn6Q03958 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pfdn6Q03958 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pfdn6Q03958 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.7■□□□□ 0.9
Pfdn6Q03958 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pfdn6Q03958 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.7■□□□□ 0.9
Pfdn6Q03958 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pfdn6Q03958 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn6Q03958 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn6Q03958 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn6Q03958 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pfdn6Q03958 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pfdn6Q03958 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pfdn6Q03958 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms