Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.31■□□□□ 0.68
Cacna1aP97445 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.31■□□□□ 0.68
Cacna1aP97445 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cacna1aP97445 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cacna1aP97445 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1aP97445 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1aP97445 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.3■□□□□ 0.68
Cacna1aP97445 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.3■□□□□ 0.68
Cacna1aP97445 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.3■□□□□ 0.68
Cacna1aP97445 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1aP97445 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.3■□□□□ 0.68
Cacna1aP97445 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cacna1aP97445 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1aP97445 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1aP97445 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1aP97445 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.29■□□□□ 0.68
Cacna1aP97445 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1aP97445 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cacna1aP97445 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cacna1aP97445 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1aP97445 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1aP97445 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Cacna1aP97445 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1aP97445 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1aP97445 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1aP97445 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1aP97445 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1aP97445 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1aP97445 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1aP97445 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1aP97445 Gm37179-201ENSMUST00000194862 823 ntBASIC19.27■□□□□ 0.68
Cacna1aP97445 Gm9870-201ENSMUST00000063874 645 ntBASIC19.27■□□□□ 0.68
Cacna1aP97445 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cacna1aP97445 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.27■□□□□ 0.68
Cacna1aP97445 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1aP97445 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cacna1aP97445 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cacna1aP97445 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cacna1aP97445 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1aP97445 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1aP97445 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.26■□□□□ 0.67
Cacna1aP97445 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1aP97445 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1aP97445 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1aP97445 Gm8493-201ENSMUST00000196881 489 ntBASIC19.26■□□□□ 0.67
Cacna1aP97445 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1aP97445 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1aP97445 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1aP97445 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.25■□□□□ 0.67
Cacna1aP97445 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1aP97445 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1aP97445 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1aP97445 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Cacna1aP97445 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1aP97445 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.24■□□□□ 0.67
Cacna1aP97445 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cacna1aP97445 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.24■□□□□ 0.67
Cacna1aP97445 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1aP97445 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cacna1aP97445 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.24■□□□□ 0.67
Cacna1aP97445 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1aP97445 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Cacna1aP97445 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.24■□□□□ 0.67
Cacna1aP97445 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1aP97445 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1aP97445 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1aP97445 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1aP97445 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.23■□□□□ 0.67
Cacna1aP97445 Gm22325-201ENSMUST00000158904 308 ntBASIC19.23■□□□□ 0.67
Cacna1aP97445 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1aP97445 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.23■□□□□ 0.67
Cacna1aP97445 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1aP97445 Gm42569-201ENSMUST00000200539 472 ntBASIC19.22■□□□□ 0.67
Cacna1aP97445 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.22■□□□□ 0.67
Cacna1aP97445 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1aP97445 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1aP97445 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1aP97445 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1aP97445 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1aP97445 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1aP97445 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1aP97445 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1aP97445 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1aP97445 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.21■□□□□ 0.67
Cacna1aP97445 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1aP97445 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1aP97445 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cacna1aP97445 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1aP97445 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1aP97445 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.21■□□□□ 0.67
Cacna1aP97445 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1aP97445 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cacna1aP97445 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1aP97445 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Cacna1aP97445 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cacna1aP97445 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1aP97445 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1aP97445 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1aP97445 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1aP97445 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms