Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf1P81269 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.98■□□□□ 0.47
Atf1P81269 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf1P81269 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.98■□□□□ 0.47
Atf1P81269 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf1P81269 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf1P81269 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Atf1P81269 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf1P81269 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf1P81269 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Atf1P81269 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf1P81269 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
Atf1P81269 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf1P81269 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf1P81269 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Atf1P81269 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.97■□□□□ 0.47
Atf1P81269 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Atf1P81269 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.97■□□□□ 0.47
Atf1P81269 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Atf1P81269 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.97■□□□□ 0.47
Atf1P81269 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf1P81269 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf1P81269 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf1P81269 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atf1P81269 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Atf1P81269 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf1P81269 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf1P81269 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf1P81269 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Atf1P81269 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Atf1P81269 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf1P81269 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Atf1P81269 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf1P81269 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf1P81269 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Atf1P81269 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Atf1P81269 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.95■□□□□ 0.46
Atf1P81269 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.95■□□□□ 0.46
Atf1P81269 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Atf1P81269 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Atf1P81269 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Atf1P81269 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Atf1P81269 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf1P81269 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf1P81269 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf1P81269 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Atf1P81269 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Atf1P81269 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Atf1P81269 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.93■□□□□ 0.46
Atf1P81269 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.93■□□□□ 0.46
Atf1P81269 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Atf1P81269 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Atf1P81269 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf1P81269 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf1P81269 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf1P81269 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf1P81269 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.92■□□□□ 0.46
Atf1P81269 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.92■□□□□ 0.46
Atf1P81269 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.92■□□□□ 0.46
Atf1P81269 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf1P81269 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf1P81269 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf1P81269 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf1P81269 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Atf1P81269 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atf1P81269 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atf1P81269 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atf1P81269 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atf1P81269 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.91■□□□□ 0.46
Atf1P81269 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Atf1P81269 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.91■□□□□ 0.46
Atf1P81269 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atf1P81269 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Atf1P81269 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf1P81269 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf1P81269 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.9■□□□□ 0.46
Atf1P81269 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Atf1P81269 Gm45444-201ENSMUST00000211394 898 ntBASIC17.9■□□□□ 0.46
Atf1P81269 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Atf1P81269 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf1P81269 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.9■□□□□ 0.46
Atf1P81269 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf1P81269 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Atf1P81269 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Atf1P81269 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Atf1P81269 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms