Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sec61a1P61620 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a1P61620 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a1P61620 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a1P61620 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a1P61620 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a1P61620 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.13■□□□□ 0.49
Sec61a1P61620 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Sec61a1P61620 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a1P61620 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a1P61620 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a1P61620 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a1P61620 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a1P61620 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sec61a1P61620 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sec61a1P61620 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sec61a1P61620 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.12■□□□□ 0.49
Sec61a1P61620 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sec61a1P61620 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sec61a1P61620 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sec61a1P61620 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sec61a1P61620 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Sec61a1P61620 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sec61a1P61620 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Sec61a1P61620 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.11■□□□□ 0.49
Sec61a1P61620 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sec61a1P61620 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sec61a1P61620 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sec61a1P61620 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a1P61620 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a1P61620 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a1P61620 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a1P61620 Gm13238-201ENSMUST00000117655 780 ntBASIC18.1■□□□□ 0.49
Sec61a1P61620 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a1P61620 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a1P61620 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a1P61620 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a1P61620 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a1P61620 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a1P61620 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a1P61620 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sec61a1P61620 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sec61a1P61620 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Sec61a1P61620 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sec61a1P61620 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sec61a1P61620 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sec61a1P61620 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Sec61a1P61620 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.09■□□□□ 0.49
Sec61a1P61620 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Sec61a1P61620 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sec61a1P61620 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
Sec61a1P61620 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.08■□□□□ 0.49
Sec61a1P61620 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sec61a1P61620 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sec61a1P61620 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sec61a1P61620 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.08■□□□□ 0.49
Sec61a1P61620 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sec61a1P61620 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sec61a1P61620 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sec61a1P61620 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Sec61a1P61620 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Sec61a1P61620 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sec61a1P61620 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sec61a1P61620 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.08■□□□□ 0.48
Sec61a1P61620 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.08■□□□□ 0.48
Sec61a1P61620 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sec61a1P61620 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sec61a1P61620 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sec61a1P61620 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sec61a1P61620 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sec61a1P61620 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sec61a1P61620 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sec61a1P61620 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sec61a1P61620 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sec61a1P61620 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Sec61a1P61620 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Sec61a1P61620 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sec61a1P61620 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sec61a1P61620 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sec61a1P61620 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sec61a1P61620 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.06■□□□□ 0.48
Sec61a1P61620 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sec61a1P61620 Gm5812-201ENSMUST00000061073 957 ntBASIC18.06■□□□□ 0.48
Sec61a1P61620 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sec61a1P61620 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Sec61a1P61620 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sec61a1P61620 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sec61a1P61620 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sec61a1P61620 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sec61a1P61620 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sec61a1P61620 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sec61a1P61620 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sec61a1P61620 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sec61a1P61620 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sec61a1P61620 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sec61a1P61620 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.05■□□□□ 0.48
Sec61a1P61620 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sec61a1P61620 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sec61a1P61620 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sec61a1P61620 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms