Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tubgcp3P58854 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tubgcp3P58854 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tubgcp3P58854 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tubgcp3P58854 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tubgcp3P58854 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tubgcp3P58854 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tubgcp3P58854 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tubgcp3P58854 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.2■□□□□ 0.98
Tubgcp3P58854 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Tubgcp3P58854 Gm43566-201ENSMUST00000196851 808 ntBASIC21.2■□□□□ 0.98
Tubgcp3P58854 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.2■□□□□ 0.98
Tubgcp3P58854 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tubgcp3P58854 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Tubgcp3P58854 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Tubgcp3P58854 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tubgcp3P58854 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.19■□□□□ 0.98
Tubgcp3P58854 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tubgcp3P58854 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tubgcp3P58854 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Tubgcp3P58854 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tubgcp3P58854 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tubgcp3P58854 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tubgcp3P58854 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tubgcp3P58854 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tubgcp3P58854 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tubgcp3P58854 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Tubgcp3P58854 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tubgcp3P58854 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tubgcp3P58854 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tubgcp3P58854 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tubgcp3P58854 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tubgcp3P58854 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tubgcp3P58854 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tubgcp3P58854 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.17■□□□□ 0.98
Tubgcp3P58854 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tubgcp3P58854 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.17■□□□□ 0.98
Tubgcp3P58854 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tubgcp3P58854 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Tubgcp3P58854 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tubgcp3P58854 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Tubgcp3P58854 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tubgcp3P58854 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tubgcp3P58854 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tubgcp3P58854 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tubgcp3P58854 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tubgcp3P58854 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tubgcp3P58854 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tubgcp3P58854 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.16■□□□□ 0.98
Tubgcp3P58854 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Tubgcp3P58854 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tubgcp3P58854 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tubgcp3P58854 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Tubgcp3P58854 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tubgcp3P58854 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tubgcp3P58854 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.15■□□□□ 0.98
Tubgcp3P58854 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tubgcp3P58854 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
Tubgcp3P58854 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tubgcp3P58854 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tubgcp3P58854 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tubgcp3P58854 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Tubgcp3P58854 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.97
Tubgcp3P58854 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tubgcp3P58854 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tubgcp3P58854 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.13■□□□□ 0.97
Tubgcp3P58854 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
Tubgcp3P58854 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Tubgcp3P58854 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tubgcp3P58854 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Tubgcp3P58854 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Tubgcp3P58854 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tubgcp3P58854 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Tubgcp3P58854 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tubgcp3P58854 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tubgcp3P58854 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.12■□□□□ 0.97
Tubgcp3P58854 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Tubgcp3P58854 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tubgcp3P58854 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.11■□□□□ 0.97
Tubgcp3P58854 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.11■□□□□ 0.97
Tubgcp3P58854 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tubgcp3P58854 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.11■□□□□ 0.97
Tubgcp3P58854 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tubgcp3P58854 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Tubgcp3P58854 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tubgcp3P58854 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tubgcp3P58854 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tubgcp3P58854 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Tubgcp3P58854 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tubgcp3P58854 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Tubgcp3P58854 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubgcp3P58854 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubgcp3P58854 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubgcp3P58854 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubgcp3P58854 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Tubgcp3P58854 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubgcp3P58854 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubgcp3P58854 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubgcp3P58854 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubgcp3P58854 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms