Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.36■□□□□ 0.69
Sox6P40645 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox6P40645 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox6P40645 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox6P40645 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox6P40645 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.35■□□□□ 0.69
Sox6P40645 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.35■□□□□ 0.69
Sox6P40645 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox6P40645 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox6P40645 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sox6P40645 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox6P40645 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox6P40645 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sox6P40645 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sox6P40645 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sox6P40645 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.34■□□□□ 0.69
Sox6P40645 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox6P40645 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox6P40645 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sox6P40645 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.34■□□□□ 0.69
Sox6P40645 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.33■□□□□ 0.68
Sox6P40645 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Sox6P40645 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox6P40645 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox6P40645 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox6P40645 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox6P40645 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox6P40645 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.32■□□□□ 0.68
Sox6P40645 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sox6P40645 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.32■□□□□ 0.68
Sox6P40645 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sox6P40645 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox6P40645 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox6P40645 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox6P40645 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox6P40645 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox6P40645 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox6P40645 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox6P40645 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sox6P40645 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sox6P40645 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox6P40645 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox6P40645 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sox6P40645 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.31■□□□□ 0.68
Sox6P40645 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox6P40645 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sox6P40645 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox6P40645 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sox6P40645 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox6P40645 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox6P40645 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox6P40645 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox6P40645 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox6P40645 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox6P40645 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox6P40645 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.3■□□□□ 0.68
Sox6P40645 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox6P40645 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox6P40645 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox6P40645 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sox6P40645 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox6P40645 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sox6P40645 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Sox6P40645 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sox6P40645 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sox6P40645 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.29■□□□□ 0.68
Sox6P40645 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.29■□□□□ 0.68
Sox6P40645 Gm5921-201ENSMUST00000075898 882 ntBASIC19.29■□□□□ 0.68
Sox6P40645 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sox6P40645 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sox6P40645 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox6P40645 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox6P40645 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox6P40645 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Sox6P40645 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox6P40645 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.28■□□□□ 0.68
Sox6P40645 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.28■□□□□ 0.68
Sox6P40645 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox6P40645 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox6P40645 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.28■□□□□ 0.68
Sox6P40645 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox6P40645 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox6P40645 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox6P40645 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sox6P40645 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.28■□□□□ 0.68
Sox6P40645 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox6P40645 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox6P40645 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox6P40645 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox6P40645 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sox6P40645 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Sox6P40645 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.27■□□□□ 0.68
Sox6P40645 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sox6P40645 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sox6P40645 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
Sox6P40645 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox6P40645 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sox6P40645 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sox6P40645 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sox6P40645 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms