Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ChkaO54804 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChkaO54804 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ChkaO54804 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChkaO54804 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ChkaO54804 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.98■□□□□ 0.95
ChkaO54804 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.98■□□□□ 0.95
ChkaO54804 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ChkaO54804 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ChkaO54804 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChkaO54804 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChkaO54804 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChkaO54804 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ChkaO54804 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.97■□□□□ 0.95
ChkaO54804 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChkaO54804 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
ChkaO54804 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChkaO54804 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChkaO54804 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ChkaO54804 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ChkaO54804 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChkaO54804 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ChkaO54804 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ChkaO54804 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ChkaO54804 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ChkaO54804 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.96■□□□□ 0.95
ChkaO54804 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChkaO54804 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChkaO54804 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChkaO54804 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ChkaO54804 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ChkaO54804 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ChkaO54804 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ChkaO54804 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ChkaO54804 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ChkaO54804 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.95■□□□□ 0.94
ChkaO54804 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.95■□□□□ 0.94
ChkaO54804 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ChkaO54804 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.95■□□□□ 0.94
ChkaO54804 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ChkaO54804 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
ChkaO54804 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ChkaO54804 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkaO54804 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ChkaO54804 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkaO54804 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkaO54804 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkaO54804 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ChkaO54804 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkaO54804 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ChkaO54804 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkaO54804 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ChkaO54804 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ChkaO54804 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ChkaO54804 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChkaO54804 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ChkaO54804 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ChkaO54804 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ChkaO54804 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ChkaO54804 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ChkaO54804 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ChkaO54804 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ChkaO54804 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ChkaO54804 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ChkaO54804 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ChkaO54804 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.91■□□□□ 0.94
ChkaO54804 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChkaO54804 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ChkaO54804 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ChkaO54804 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChkaO54804 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChkaO54804 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ChkaO54804 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ChkaO54804 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.9■□□□□ 0.94
ChkaO54804 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChkaO54804 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ChkaO54804 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChkaO54804 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChkaO54804 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ChkaO54804 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ChkaO54804 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
ChkaO54804 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ChkaO54804 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ChkaO54804 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ChkaO54804 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ChkaO54804 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ChkaO54804 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ChkaO54804 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChkaO54804 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChkaO54804 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChkaO54804 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ChkaO54804 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChkaO54804 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.88■□□□□ 0.93
ChkaO54804 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ChkaO54804 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ChkaO54804 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ChkaO54804 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.87■□□□□ 0.93
ChkaO54804 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ChkaO54804 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ChkaO54804 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 327 ms