Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lnp1A0A1B0GSK3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
Lnp1A0A1B0GSK3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.28■□□□□ 0.36
Lnp1A0A1B0GSK3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lnp1A0A1B0GSK3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.28■□□□□ 0.36
Lnp1A0A1B0GSK3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lnp1A0A1B0GSK3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Lnp1A0A1B0GSK3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lnp1A0A1B0GSK3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lnp1A0A1B0GSK3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lnp1A0A1B0GSK3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lnp1A0A1B0GSK3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lnp1A0A1B0GSK3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lnp1A0A1B0GSK3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lnp1A0A1B0GSK3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lnp1A0A1B0GSK3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Lnp1A0A1B0GSK3 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.27■□□□□ 0.36
Lnp1A0A1B0GSK3 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.27■□□□□ 0.35
Lnp1A0A1B0GSK3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lnp1A0A1B0GSK3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Lnp1A0A1B0GSK3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lnp1A0A1B0GSK3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lnp1A0A1B0GSK3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lnp1A0A1B0GSK3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lnp1A0A1B0GSK3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.26■□□□□ 0.35
Lnp1A0A1B0GSK3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lnp1A0A1B0GSK3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lnp1A0A1B0GSK3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lnp1A0A1B0GSK3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Lnp1A0A1B0GSK3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lnp1A0A1B0GSK3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lnp1A0A1B0GSK3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lnp1A0A1B0GSK3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.25■□□□□ 0.35
Lnp1A0A1B0GSK3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lnp1A0A1B0GSK3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lnp1A0A1B0GSK3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lnp1A0A1B0GSK3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lnp1A0A1B0GSK3 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.25■□□□□ 0.35
Lnp1A0A1B0GSK3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lnp1A0A1B0GSK3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lnp1A0A1B0GSK3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lnp1A0A1B0GSK3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lnp1A0A1B0GSK3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lnp1A0A1B0GSK3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lnp1A0A1B0GSK3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.24■□□□□ 0.35
Lnp1A0A1B0GSK3 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.24■□□□□ 0.35
Lnp1A0A1B0GSK3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lnp1A0A1B0GSK3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lnp1A0A1B0GSK3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.24■□□□□ 0.35
Lnp1A0A1B0GSK3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lnp1A0A1B0GSK3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lnp1A0A1B0GSK3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lnp1A0A1B0GSK3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Lnp1A0A1B0GSK3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lnp1A0A1B0GSK3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.23■□□□□ 0.35
Lnp1A0A1B0GSK3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lnp1A0A1B0GSK3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.23■□□□□ 0.35
Lnp1A0A1B0GSK3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lnp1A0A1B0GSK3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lnp1A0A1B0GSK3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.23■□□□□ 0.35
Lnp1A0A1B0GSK3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lnp1A0A1B0GSK3 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lnp1A0A1B0GSK3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lnp1A0A1B0GSK3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lnp1A0A1B0GSK3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lnp1A0A1B0GSK3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lnp1A0A1B0GSK3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.22■□□□□ 0.35
Lnp1A0A1B0GSK3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lnp1A0A1B0GSK3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lnp1A0A1B0GSK3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lnp1A0A1B0GSK3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lnp1A0A1B0GSK3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lnp1A0A1B0GSK3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lnp1A0A1B0GSK3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Lnp1A0A1B0GSK3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lnp1A0A1B0GSK3 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Lnp1A0A1B0GSK3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Lnp1A0A1B0GSK3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Lnp1A0A1B0GSK3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lnp1A0A1B0GSK3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lnp1A0A1B0GSK3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lnp1A0A1B0GSK3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lnp1A0A1B0GSK3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Lnp1A0A1B0GSK3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lnp1A0A1B0GSK3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lnp1A0A1B0GSK3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lnp1A0A1B0GSK3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lnp1A0A1B0GSK3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lnp1A0A1B0GSK3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lnp1A0A1B0GSK3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lnp1A0A1B0GSK3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lnp1A0A1B0GSK3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.19■□□□□ 0.34
Lnp1A0A1B0GSK3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lnp1A0A1B0GSK3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lnp1A0A1B0GSK3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lnp1A0A1B0GSK3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lnp1A0A1B0GSK3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lnp1A0A1B0GSK3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Lnp1A0A1B0GSK3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lnp1A0A1B0GSK3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms