Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-5A0A075B621 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav6n-5A0A075B621 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav6n-5A0A075B621 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6n-5A0A075B621 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6n-5A0A075B621 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav6n-5A0A075B621 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-5A0A075B621 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav6n-5A0A075B621 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-5A0A075B621 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
Trav6n-5A0A075B621 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Trav6n-5A0A075B621 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-5A0A075B621 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-5A0A075B621 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-5A0A075B621 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav6n-5A0A075B621 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-5A0A075B621 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav6n-5A0A075B621 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6n-5A0A075B621 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6n-5A0A075B621 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav6n-5A0A075B621 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav6n-5A0A075B621 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.07■□□□□ 0.16
Trav6n-5A0A075B621 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6n-5A0A075B621 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6n-5A0A075B621 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6n-5A0A075B621 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav6n-5A0A075B621 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav6n-5A0A075B621 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav6n-5A0A075B621 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-5A0A075B621 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-5A0A075B621 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-5A0A075B621 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav6n-5A0A075B621 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.06■□□□□ 0.16
Trav6n-5A0A075B621 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-5A0A075B621 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav6n-5A0A075B621 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Gm45364-201ENSMUST00000210883 159 ntBASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav6n-5A0A075B621 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-5A0A075B621 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.04■□□□□ 0.16
Trav6n-5A0A075B621 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-5A0A075B621 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-5A0A075B621 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-5A0A075B621 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-5A0A075B621 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-5A0A075B621 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-5A0A075B621 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-5A0A075B621 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-5A0A075B621 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav6n-5A0A075B621 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-5A0A075B621 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-5A0A075B621 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-5A0A075B621 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-5A0A075B621 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Trav6n-5A0A075B621 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-5A0A075B621 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-5A0A075B621 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Trav6n-5A0A075B621 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-5A0A075B621 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-5A0A075B621 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav6n-5A0A075B621 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-5A0A075B621 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-5A0A075B621 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav6n-5A0A075B621 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6n-5A0A075B621 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6n-5A0A075B621 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6n-5A0A075B621 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav6n-5A0A075B621 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.02■□□□□ 0.16
Trav6n-5A0A075B621 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6n-5A0A075B621 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav6n-5A0A075B621 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms