Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cldn9Q9Z0S7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cldn9Q9Z0S7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cldn9Q9Z0S7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cldn9Q9Z0S7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
Cldn9Q9Z0S7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Cldn9Q9Z0S7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Cldn9Q9Z0S7 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cldn9Q9Z0S7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.13■□□□□ 0.81
Cldn9Q9Z0S7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cldn9Q9Z0S7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.13■□□□□ 0.81
Cldn9Q9Z0S7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cldn9Q9Z0S7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cldn9Q9Z0S7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn9Q9Z0S7 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.12■□□□□ 0.81
Cldn9Q9Z0S7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn9Q9Z0S7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn9Q9Z0S7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.12■□□□□ 0.81
Cldn9Q9Z0S7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.12■□□□□ 0.81
Cldn9Q9Z0S7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn9Q9Z0S7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn9Q9Z0S7 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.11■□□□□ 0.81
Cldn9Q9Z0S7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn9Q9Z0S7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn9Q9Z0S7 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn9Q9Z0S7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn9Q9Z0S7 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn9Q9Z0S7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Cldn9Q9Z0S7 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn9Q9Z0S7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.1■□□□□ 0.81
Cldn9Q9Z0S7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn9Q9Z0S7 Gm5921-201ENSMUST00000075898 882 ntBASIC20.1■□□□□ 0.81
Cldn9Q9Z0S7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn9Q9Z0S7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn9Q9Z0S7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn9Q9Z0S7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn9Q9Z0S7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn9Q9Z0S7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn9Q9Z0S7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Cldn9Q9Z0S7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn9Q9Z0S7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Cldn9Q9Z0S7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn9Q9Z0S7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn9Q9Z0S7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn9Q9Z0S7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn9Q9Z0S7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.09■□□□□ 0.81
Cldn9Q9Z0S7 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn9Q9Z0S7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.08■□□□□ 0.81
Cldn9Q9Z0S7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn9Q9Z0S7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.08■□□□□ 0.81
Cldn9Q9Z0S7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn9Q9Z0S7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn9Q9Z0S7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn9Q9Z0S7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn9Q9Z0S7 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn9Q9Z0S7 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.07■□□□□ 0.8
Cldn9Q9Z0S7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn9Q9Z0S7 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn9Q9Z0S7 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.07■□□□□ 0.8
Cldn9Q9Z0S7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn9Q9Z0S7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Cldn9Q9Z0S7 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
Cldn9Q9Z0S7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn9Q9Z0S7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn9Q9Z0S7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn9Q9Z0S7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.06■□□□□ 0.8
Cldn9Q9Z0S7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Cldn9Q9Z0S7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn9Q9Z0S7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn9Q9Z0S7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.05■□□□□ 0.8
Cldn9Q9Z0S7 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn9Q9Z0S7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cldn9Q9Z0S7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cldn9Q9Z0S7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn9Q9Z0S7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn9Q9Z0S7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn9Q9Z0S7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn9Q9Z0S7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn9Q9Z0S7 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.04■□□□□ 0.8
Cldn9Q9Z0S7 Gm43566-201ENSMUST00000196851 808 ntBASIC20.04■□□□□ 0.8
Cldn9Q9Z0S7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.04■□□□□ 0.8
Cldn9Q9Z0S7 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.04■□□□□ 0.8
Cldn9Q9Z0S7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn9Q9Z0S7 Gm13238-201ENSMUST00000117655 780 ntBASIC20.03■□□□□ 0.8
Cldn9Q9Z0S7 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.03■□□□□ 0.8
Cldn9Q9Z0S7 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn9Q9Z0S7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Cldn9Q9Z0S7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Cldn9Q9Z0S7 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn9Q9Z0S7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Cldn9Q9Z0S7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn9Q9Z0S7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn9Q9Z0S7 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.02■□□□□ 0.8
Cldn9Q9Z0S7 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn9Q9Z0S7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn9Q9Z0S7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn9Q9Z0S7 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cldn9Q9Z0S7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cldn9Q9Z0S7 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cldn9Q9Z0S7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms