Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cdh20Q9Z0M3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh20Q9Z0M3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh20Q9Z0M3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cdh20Q9Z0M3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Cdh20Q9Z0M3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cdh20Q9Z0M3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.36■□□□□ 0.69
Cdh20Q9Z0M3 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh20Q9Z0M3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
Cdh20Q9Z0M3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Cdh20Q9Z0M3 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh20Q9Z0M3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh20Q9Z0M3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh20Q9Z0M3 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.35■□□□□ 0.69
Cdh20Q9Z0M3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cdh20Q9Z0M3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdh20Q9Z0M3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cdh20Q9Z0M3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh20Q9Z0M3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cdh20Q9Z0M3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh20Q9Z0M3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cdh20Q9Z0M3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.34■□□□□ 0.69
Cdh20Q9Z0M3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh20Q9Z0M3 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh20Q9Z0M3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdh20Q9Z0M3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdh20Q9Z0M3 Gm13238-201ENSMUST00000117655 780 ntBASIC19.33■□□□□ 0.68
Cdh20Q9Z0M3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh20Q9Z0M3 Gm43566-201ENSMUST00000196851 808 ntBASIC19.33■□□□□ 0.68
Cdh20Q9Z0M3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh20Q9Z0M3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Cdh20Q9Z0M3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh20Q9Z0M3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Cdh20Q9Z0M3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdh20Q9Z0M3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh20Q9Z0M3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh20Q9Z0M3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh20Q9Z0M3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.32■□□□□ 0.68
Cdh20Q9Z0M3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cdh20Q9Z0M3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.32■□□□□ 0.68
Cdh20Q9Z0M3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh20Q9Z0M3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdh20Q9Z0M3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.32■□□□□ 0.68
Cdh20Q9Z0M3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Cdh20Q9Z0M3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cdh20Q9Z0M3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh20Q9Z0M3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh20Q9Z0M3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh20Q9Z0M3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh20Q9Z0M3 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.31■□□□□ 0.68
Cdh20Q9Z0M3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh20Q9Z0M3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh20Q9Z0M3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdh20Q9Z0M3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh20Q9Z0M3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh20Q9Z0M3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh20Q9Z0M3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.3■□□□□ 0.68
Cdh20Q9Z0M3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cdh20Q9Z0M3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdh20Q9Z0M3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh20Q9Z0M3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh20Q9Z0M3 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh20Q9Z0M3 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.29■□□□□ 0.68
Cdh20Q9Z0M3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh20Q9Z0M3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh20Q9Z0M3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdh20Q9Z0M3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.29■□□□□ 0.68
Cdh20Q9Z0M3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh20Q9Z0M3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh20Q9Z0M3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdh20Q9Z0M3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh20Q9Z0M3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh20Q9Z0M3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh20Q9Z0M3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh20Q9Z0M3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh20Q9Z0M3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdh20Q9Z0M3 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh20Q9Z0M3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh20Q9Z0M3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh20Q9Z0M3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cdh20Q9Z0M3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh20Q9Z0M3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh20Q9Z0M3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh20Q9Z0M3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdh20Q9Z0M3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh20Q9Z0M3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh20Q9Z0M3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh20Q9Z0M3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh20Q9Z0M3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cdh20Q9Z0M3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh20Q9Z0M3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Cdh20Q9Z0M3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.25■□□□□ 0.67
Cdh20Q9Z0M3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdh20Q9Z0M3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh20Q9Z0M3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh20Q9Z0M3 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh20Q9Z0M3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.24■□□□□ 0.67
Cdh20Q9Z0M3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cdh20Q9Z0M3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdh20Q9Z0M3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms