Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx6Q9R1R0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lhx6Q9R1R0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Lhx6Q9R1R0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.46■□□□□ 0.71
Lhx6Q9R1R0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.46■□□□□ 0.71
Lhx6Q9R1R0 Gm27405-201ENSMUST00000184201 112 ntBASIC19.46■□□□□ 0.71
Lhx6Q9R1R0 Gm43017-201ENSMUST00000198296 752 ntBASIC19.46■□□□□ 0.71
Lhx6Q9R1R0 Gm10399-202ENSMUST00000202768 748 ntBASIC19.46■□□□□ 0.71
Lhx6Q9R1R0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx6Q9R1R0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx6Q9R1R0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Lhx6Q9R1R0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx6Q9R1R0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.45■□□□□ 0.7
Lhx6Q9R1R0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.45■□□□□ 0.7
Lhx6Q9R1R0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.45■□□□□ 0.7
Lhx6Q9R1R0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.45■□□□□ 0.7
Lhx6Q9R1R0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx6Q9R1R0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx6Q9R1R0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx6Q9R1R0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx6Q9R1R0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lhx6Q9R1R0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.45■□□□□ 0.7
Lhx6Q9R1R0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx6Q9R1R0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx6Q9R1R0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Lhx6Q9R1R0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx6Q9R1R0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx6Q9R1R0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lhx6Q9R1R0 Gm42569-201ENSMUST00000200539 472 ntBASIC19.44■□□□□ 0.7
Lhx6Q9R1R0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx6Q9R1R0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lhx6Q9R1R0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Lhx6Q9R1R0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx6Q9R1R0 Gm19891-201ENSMUST00000189771 303 ntBASIC19.43■□□□□ 0.7
Lhx6Q9R1R0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx6Q9R1R0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx6Q9R1R0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx6Q9R1R0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx6Q9R1R0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Lhx6Q9R1R0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lhx6Q9R1R0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx6Q9R1R0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.42■□□□□ 0.7
Lhx6Q9R1R0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Lhx6Q9R1R0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.42■□□□□ 0.7
Lhx6Q9R1R0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Lhx6Q9R1R0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx6Q9R1R0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.42■□□□□ 0.7
Lhx6Q9R1R0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lhx6Q9R1R0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx6Q9R1R0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx6Q9R1R0 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.41■□□□□ 0.7
Lhx6Q9R1R0 Gm22325-201ENSMUST00000158904 308 ntBASIC19.41■□□□□ 0.7
Lhx6Q9R1R0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Lhx6Q9R1R0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Lhx6Q9R1R0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx6Q9R1R0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Lhx6Q9R1R0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Lhx6Q9R1R0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lhx6Q9R1R0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx6Q9R1R0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx6Q9R1R0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx6Q9R1R0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx6Q9R1R0 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx6Q9R1R0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx6Q9R1R0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx6Q9R1R0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lhx6Q9R1R0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lhx6Q9R1R0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Lhx6Q9R1R0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx6Q9R1R0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx6Q9R1R0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx6Q9R1R0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Lhx6Q9R1R0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx6Q9R1R0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Lhx6Q9R1R0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx6Q9R1R0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lhx6Q9R1R0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Lhx6Q9R1R0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx6Q9R1R0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.38■□□□□ 0.69
Lhx6Q9R1R0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Lhx6Q9R1R0 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lhx6Q9R1R0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Lhx6Q9R1R0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Lhx6Q9R1R0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Lhx6Q9R1R0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx6Q9R1R0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Lhx6Q9R1R0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx6Q9R1R0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Lhx6Q9R1R0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx6Q9R1R0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lhx6Q9R1R0 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Lhx6Q9R1R0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx6Q9R1R0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx6Q9R1R0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx6Q9R1R0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx6Q9R1R0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.36■□□□□ 0.69
Lhx6Q9R1R0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lhx6Q9R1R0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Lhx6Q9R1R0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lhx6Q9R1R0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms