Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Msantd3Q9CR78 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Msantd3Q9CR78 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Msantd3Q9CR78 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Msantd3Q9CR78 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.06■□□□□ 0.8
Msantd3Q9CR78 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Msantd3Q9CR78 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Msantd3Q9CR78 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.06■□□□□ 0.8
Msantd3Q9CR78 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Msantd3Q9CR78 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Msantd3Q9CR78 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Msantd3Q9CR78 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msantd3Q9CR78 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msantd3Q9CR78 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msantd3Q9CR78 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msantd3Q9CR78 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msantd3Q9CR78 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Msantd3Q9CR78 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Msantd3Q9CR78 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Msantd3Q9CR78 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.04■□□□□ 0.8
Msantd3Q9CR78 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.04■□□□□ 0.8
Msantd3Q9CR78 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msantd3Q9CR78 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.04■□□□□ 0.8
Msantd3Q9CR78 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Msantd3Q9CR78 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msantd3Q9CR78 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Msantd3Q9CR78 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msantd3Q9CR78 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Msantd3Q9CR78 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Msantd3Q9CR78 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msantd3Q9CR78 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Msantd3Q9CR78 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Msantd3Q9CR78 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Msantd3Q9CR78 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Msantd3Q9CR78 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Msantd3Q9CR78 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Msantd3Q9CR78 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Msantd3Q9CR78 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Msantd3Q9CR78 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Msantd3Q9CR78 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msantd3Q9CR78 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msantd3Q9CR78 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.01■□□□□ 0.79
Msantd3Q9CR78 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msantd3Q9CR78 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Msantd3Q9CR78 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Msantd3Q9CR78 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msantd3Q9CR78 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msantd3Q9CR78 Gm9870-201ENSMUST00000063874 645 ntBASIC20.01■□□□□ 0.79
Msantd3Q9CR78 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Msantd3Q9CR78 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msantd3Q9CR78 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Msantd3Q9CR78 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20■□□□□ 0.79
Msantd3Q9CR78 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msantd3Q9CR78 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msantd3Q9CR78 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msantd3Q9CR78 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20■□□□□ 0.79
Msantd3Q9CR78 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msantd3Q9CR78 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20■□□□□ 0.79
Msantd3Q9CR78 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Msantd3Q9CR78 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Msantd3Q9CR78 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Msantd3Q9CR78 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.99■□□□□ 0.79
Msantd3Q9CR78 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.99■□□□□ 0.79
Msantd3Q9CR78 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msantd3Q9CR78 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msantd3Q9CR78 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.99■□□□□ 0.79
Msantd3Q9CR78 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msantd3Q9CR78 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Msantd3Q9CR78 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Msantd3Q9CR78 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msantd3Q9CR78 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msantd3Q9CR78 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msantd3Q9CR78 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msantd3Q9CR78 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msantd3Q9CR78 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Msantd3Q9CR78 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msantd3Q9CR78 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msantd3Q9CR78 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msantd3Q9CR78 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msantd3Q9CR78 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Msantd3Q9CR78 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msantd3Q9CR78 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msantd3Q9CR78 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Msantd3Q9CR78 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msantd3Q9CR78 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msantd3Q9CR78 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msantd3Q9CR78 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msantd3Q9CR78 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Msantd3Q9CR78 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msantd3Q9CR78 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msantd3Q9CR78 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msantd3Q9CR78 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msantd3Q9CR78 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.96■□□□□ 0.79
Msantd3Q9CR78 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Msantd3Q9CR78 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msantd3Q9CR78 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msantd3Q9CR78 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Msantd3Q9CR78 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Msantd3Q9CR78 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Msantd3Q9CR78 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms