Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Q9CR55 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.18■□□□□ 0.66
Q9CR55 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q9CR55 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.18■□□□□ 0.66
Q9CR55 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.17■□□□□ 0.66
Q9CR55 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q9CR55 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Q9CR55 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Q9CR55 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q9CR55 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Q9CR55 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q9CR55 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Q9CR55 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Q9CR55 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q9CR55 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Q9CR55 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q9CR55 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Q9CR55 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q9CR55 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q9CR55 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Q9CR55 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.16■□□□□ 0.66
Q9CR55 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q9CR55 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q9CR55 Gm11599-201ENSMUST00000118720 878 ntBASIC19.15■□□□□ 0.66
Q9CR55 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.15■□□□□ 0.66
Q9CR55 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q9CR55 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q9CR55 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q9CR55 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Q9CR55 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.15■□□□□ 0.66
Q9CR55 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q9CR55 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Q9CR55 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Q9CR55 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Q9CR55 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Q9CR55 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.14■□□□□ 0.65
Q9CR55 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.14■□□□□ 0.65
Q9CR55 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Q9CR55 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Q9CR55 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Q9CR55 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q9CR55 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q9CR55 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q9CR55 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q9CR55 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q9CR55 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q9CR55 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q9CR55 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q9CR55 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Q9CR55 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q9CR55 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q9CR55 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Q9CR55 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q9CR55 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q9CR55 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q9CR55 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.11■□□□□ 0.65
Q9CR55 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.11■□□□□ 0.65
Q9CR55 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q9CR55 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q9CR55 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q9CR55 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Q9CR55 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q9CR55 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.1■□□□□ 0.65
Q9CR55 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q9CR55 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q9CR55 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q9CR55 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q9CR55 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q9CR55 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q9CR55 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q9CR55 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q9CR55 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q9CR55 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q9CR55 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q9CR55 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Q9CR55 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.09■□□□□ 0.65
Q9CR55 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q9CR55 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.08■□□□□ 0.65
Q9CR55 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Q9CR55 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Q9CR55 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Q9CR55 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Q9CR55 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Q9CR55 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Q9CR55 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Q9CR55 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Q9CR55 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q9CR55 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q9CR55 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q9CR55 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q9CR55 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.07■□□□□ 0.64
Q9CR55 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q9CR55 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Q9CR55 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.06■□□□□ 0.64
Q9CR55 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q9CR55 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q9CR55 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Q9CR55 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q9CR55 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Q9CR55 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms