Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.64■□□□□ 0.89
Trim33Q99PP7 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim33Q99PP7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trim33Q99PP7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim33Q99PP7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trim33Q99PP7 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim33Q99PP7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim33Q99PP7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trim33Q99PP7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim33Q99PP7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim33Q99PP7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim33Q99PP7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim33Q99PP7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim33Q99PP7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim33Q99PP7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim33Q99PP7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim33Q99PP7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Trim33Q99PP7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim33Q99PP7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim33Q99PP7 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.61■□□□□ 0.89
Trim33Q99PP7 Gm10232-201ENSMUST00000089221 720 ntBASIC20.61■□□□□ 0.89
Trim33Q99PP7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.61■□□□□ 0.89
Trim33Q99PP7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim33Q99PP7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim33Q99PP7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trim33Q99PP7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim33Q99PP7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim33Q99PP7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim33Q99PP7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim33Q99PP7 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.6■□□□□ 0.89
Trim33Q99PP7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim33Q99PP7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim33Q99PP7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim33Q99PP7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim33Q99PP7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim33Q99PP7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim33Q99PP7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim33Q99PP7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim33Q99PP7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
Trim33Q99PP7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim33Q99PP7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.59■□□□□ 0.89
Trim33Q99PP7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trim33Q99PP7 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim33Q99PP7 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.59■□□□□ 0.89
Trim33Q99PP7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim33Q99PP7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Trim33Q99PP7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim33Q99PP7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim33Q99PP7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim33Q99PP7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim33Q99PP7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim33Q99PP7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim33Q99PP7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim33Q99PP7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim33Q99PP7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim33Q99PP7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim33Q99PP7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim33Q99PP7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim33Q99PP7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim33Q99PP7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim33Q99PP7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim33Q99PP7 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.56■□□□□ 0.88
Trim33Q99PP7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim33Q99PP7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim33Q99PP7 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim33Q99PP7 Gm15546-201ENSMUST00000122095 826 ntBASIC20.56■□□□□ 0.88
Trim33Q99PP7 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.56■□□□□ 0.88
Trim33Q99PP7 Gm15820-201ENSMUST00000201566 728 ntBASIC20.56■□□□□ 0.88
Trim33Q99PP7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trim33Q99PP7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim33Q99PP7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.56■□□□□ 0.88
Trim33Q99PP7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Trim33Q99PP7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim33Q99PP7 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim33Q99PP7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
Trim33Q99PP7 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim33Q99PP7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim33Q99PP7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim33Q99PP7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Trim33Q99PP7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim33Q99PP7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim33Q99PP7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim33Q99PP7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim33Q99PP7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim33Q99PP7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim33Q99PP7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trim33Q99PP7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim33Q99PP7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim33Q99PP7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.54■□□□□ 0.88
Trim33Q99PP7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim33Q99PP7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim33Q99PP7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim33Q99PP7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim33Q99PP7 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim33Q99PP7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim33Q99PP7 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.53■□□□□ 0.88
Trim33Q99PP7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim33Q99PP7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim33Q99PP7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim33Q99PP7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms